Detailed information NTG0801432

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: P3T93_RS06415
• Genome accession: NZ_CP119997
• Coordinates: 1285852..1286826 (+)
• Length: 324 a.a.
• NCBI ID: WP_019469347.1
• Uniprot ID: -
• Organism: Staphylococcus cohnii strain Dog166
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1280852..1291826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3T93_RS06380 (P3T93_06380)	rpmG	1281069..1281218 (+)	150	WP_019469354.1	50S ribosomal protein L33	-
P3T93_RS06385 (P3T93_06385)	-	1281353..1281895 (+)	543	WP_019469353.1	5-formyltetrahydrofolate cyclo-ligase	-
P3T93_RS06390 (P3T93_06390)	-	1281907..1283358 (+)	1452	WP_019469352.1	rhomboid family intramembrane serine protease	-
P3T93_RS06395 (P3T93_06395)	-	1283348..1283548 (+)	201	WP_103211250.1	YqgQ family protein	-
P3T93_RS06400 (P3T93_06400)	-	1283857..1284843 (+)	987	WP_019469350.1	glucokinase	-
P3T93_RS06405 (P3T93_06405)	-	1284843..1285166 (+)	324	WP_019469349.1	MTH1187 family thiamine-binding protein	-
P3T93_RS06410 (P3T93_06410)	-	1285169..1285792 (+)	624	WP_019469348.1	MBL fold metallo-hydrolase	-
P3T93_RS06415 (P3T93_06415)	comGA	1285852..1286826 (+)	975	WP_019469347.1	competence type IV pilus ATPase ComGA	Machinery gene
P3T93_RS06420 (P3T93_06425)	comGB	1287502..1287864 (+)	363	WP_323701972.1	type II secretion system F family protein	Machinery gene
P3T93_RS06425 (P3T93_06430)	comGC	1287884..1288201 (+)	318	WP_040030035.1	competence type IV pilus major pilin ComGC	Machinery gene
P3T93_RS06430 (P3T93_06435)	-	1288191..1288553 (+)	363	WP_323701245.1	competence protein	-
P3T93_RS06435 (P3T93_06440)	-	1288883..1289326 (+)	444	WP_019469343.1	ComGF family competence protein	-
P3T93_RS06440 (P3T93_06445)	-	1289491..1290015 (+)	525	WP_019469341.1	shikimate kinase	-
P3T93_RS06445 (P3T93_06450)	gcvT	1290172..1291263 (+)	1092	WP_323701249.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37095.10 Da
• Isoelectric Point: 9.2635

>NTDB_id=801432 P3T93_RS06415 WP_019469347.1 1285852..1286826(+) (comGA) [Staphylococcus cohnii strain Dog166]
MKLLFKNIIDKAINENVSDVHFIPDQNKVHIKFRKKEYLSTIETVEVHIYRKLLTYMKYQAGLDVSTHSTAQSGRYAYKL
KQLYYLRVSTLPLSLGFESCVVRIIPQYFQNSAKALSINQLFKLVHKKQGLILFSGPTGSGKSTLMYQLIVHAKEHLNVN
IITVEDPVERLVEGITQVSINEKAGINYANSFKAILRCDPDIILIGEIRDAMIAKQVIHASLSGHLVLSTIHSNNCKGAL
SRLLEMGITIQELRQTVLSIINQRLVITSKNERSLIYEQLNREDIDFYFENQLTLPNTFKNLSYKLQEMAKEGEICEETL
NRYL

Nucleotide

• Length: 975 bp

>NTDB_id=801432 P3T93_RS06415 WP_019469347.1 1285852..1286826(+) (comGA) [Staphylococcus cohnii strain Dog166]
TTGAAGTTACTCTTTAAAAACATTATTGATAAAGCTATTAATGAAAATGTATCAGATGTACATTTTATCCCTGACCAAAA
CAAAGTACACATTAAATTTAGGAAAAAAGAATATTTAAGCACTATAGAAACAGTTGAAGTTCATATTTATAGGAAATTGC
TCACATATATGAAATATCAGGCTGGCTTAGATGTCTCAACACATAGCACTGCGCAAAGTGGAAGATATGCTTACAAACTC
AAACAATTATATTATTTAAGAGTTTCAACTTTACCTTTATCTCTAGGATTTGAAAGTTGTGTAGTGAGAATTATACCTCA
ATACTTTCAAAATTCTGCAAAAGCACTTAGTATTAATCAATTATTTAAACTAGTTCATAAAAAACAAGGGTTAATACTGT
TTAGCGGTCCGACGGGATCTGGAAAAAGTACATTAATGTATCAGCTCATAGTACACGCAAAGGAGCATTTAAATGTTAAC
ATCATTACCGTAGAAGATCCTGTAGAGCGTTTAGTTGAGGGAATTACTCAAGTGTCTATCAACGAAAAAGCAGGTATTAA
TTACGCTAATTCTTTTAAGGCTATTTTGAGGTGTGATCCTGATATAATACTCATTGGTGAAATCAGGGATGCAATGATTG
CTAAACAAGTAATTCATGCAAGTTTAAGTGGGCATTTAGTACTTTCAACGATACATTCAAATAATTGTAAAGGCGCATTG
AGTAGATTATTAGAAATGGGCATTACGATTCAAGAACTGCGACAGACGGTATTAAGTATTATTAATCAGAGATTAGTAAT
CACTTCAAAGAATGAACGTTCTCTTATTTATGAACAATTAAACCGTGAAGATATAGACTTTTATTTTGAAAATCAACTTA
CACTTCCGAACACATTCAAAAATTTATCTTACAAGTTGCAAGAAATGGCAAAAGAAGGAGAAATTTGTGAAGAAACACTC
AATAGATATCTTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.951	100	0.59
comGA	Staphylococcus aureus N315	58.951	100	0.59