Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   Q3101_RS17810 Genome accession   NZ_CP133215
Coordinates   3873054..3873740 (+) Length   228 a.a.
NCBI ID   WP_064729002.1    Uniprot ID   A0A191V125
Organism   Streptomyces sp. VNUA74     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3868054..3878740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3101_RS17790 (Q3101_17790) - 3868350..3869291 (+) 942 WP_283014458.1 alpha/beta hydrolase -
  Q3101_RS17795 (Q3101_17795) - 3869480..3870472 (+) 993 WP_308883774.1 alpha/beta hydrolase -
  Q3101_RS17800 (Q3101_17800) - 3870465..3871688 (+) 1224 WP_226484241.1 acyltransferase -
  Q3101_RS17805 (Q3101_17805) - 3871681..3873057 (+) 1377 WP_256037009.1 sensor histidine kinase -
  Q3101_RS17810 (Q3101_17810) vraR 3873054..3873740 (+) 687 WP_064729002.1 response regulator transcription factor Regulator
  Q3101_RS17815 (Q3101_17815) - 3873854..3875197 (+) 1344 WP_308883778.1 histidine kinase -
  Q3101_RS17820 (Q3101_17820) vraR 3875194..3875868 (+) 675 WP_064729004.1 response regulator transcription factor Regulator
  Q3101_RS17825 (Q3101_17825) - 3875970..3877193 (+) 1224 WP_226484243.1 cytochrome P450 -
  Q3101_RS17830 (Q3101_17830) - 3877176..3877379 (-) 204 WP_308883779.1 hypothetical protein -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 24672.36 Da        Isoelectric Point: 4.8572

>NTDB_id=798759 Q3101_RS17810 WP_064729002.1 3873054..3873740(+) (vraR) [Streptomyces sp. VNUA74]
MTTSGNGRVIRVLIADDQQMVRQGFTVLLNTQPDIEVIGQAVDGRDAVAKVAEQAPDVVLMDIRMPELGGIEATRLITGA
TPEIRVLVLTTFDLDEYVYEALRAGASGFLLKDASADQLAEAVRVVAAGDALLAPGITRRLIAEFSRLDDRPRAPLKDRV
GELTERETEVLALIAQGLSNAEIARRLVVAEQTVKTHVGRILVKLGLRDRTQAAVFAYESGLVRPSGY

Nucleotide


Download         Length: 687 bp        

>NTDB_id=798759 Q3101_RS17810 WP_064729002.1 3873054..3873740(+) (vraR) [Streptomyces sp. VNUA74]
ATGACGACCAGCGGCAACGGGCGCGTGATCCGCGTCCTGATCGCCGACGACCAGCAGATGGTCCGGCAGGGCTTCACCGT
GCTGCTCAACACCCAGCCGGACATCGAGGTGATCGGGCAGGCGGTGGACGGCCGGGACGCCGTCGCCAAGGTCGCCGAAC
AGGCGCCGGACGTCGTCCTGATGGACATCCGCATGCCCGAGCTGGGCGGCATCGAGGCCACCCGGCTGATCACCGGCGCC
ACCCCGGAGATCAGGGTGCTGGTCCTGACCACCTTCGACCTCGACGAGTACGTGTACGAGGCGCTGCGGGCCGGCGCGTC
CGGCTTCCTGCTCAAGGACGCGTCCGCCGACCAGCTCGCCGAGGCGGTCCGCGTGGTGGCGGCCGGCGACGCCCTGCTCG
CGCCGGGCATCACGCGGCGGCTGATCGCGGAGTTCTCCCGGCTCGACGACCGGCCGCGCGCCCCGCTGAAGGACCGCGTG
GGCGAGCTGACCGAGCGGGAGACGGAGGTGCTCGCCCTGATCGCGCAGGGCCTGTCGAACGCGGAGATCGCCCGGCGCCT
GGTGGTCGCCGAGCAGACGGTGAAGACCCATGTGGGCCGCATCCTGGTGAAGCTGGGCCTGCGGGACCGCACCCAGGCGG
CCGTGTTCGCCTACGAGTCGGGTCTCGTGCGGCCCTCGGGGTACTGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(163-217)

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A191V125

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

44.186

94.298

0.417
  degU Bacillus subtilis subsp. subtilis str. 168

41.256

97.807

0.404