Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilN   Type   Machinery gene
Locus tag   PY247_RS07105 Genome accession   NZ_CP119223
Coordinates   1505308..1505958 (+) Length   216 a.a.
NCBI ID   WP_159723954.1    Uniprot ID   A0A653K792
Organism   Acinetobacter proteolyticus strain AP54     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1500308..1510958
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY247_RS07090 (PY247_07090) - 1500650..1501498 (+) 849 WP_275573866.1 methyltransferase domain-containing protein -
  PY247_RS07095 (PY247_07095) ponA 1501482..1504086 (-) 2605 Protein_1369 penicillin-binding protein PBP1a -
  PY247_RS07100 (PY247_07100) comM 1504250..1505308 (+) 1059 WP_004657415.1 pilus assembly protein PilM Machinery gene
  PY247_RS07105 (PY247_07105) pilN 1505308..1505958 (+) 651 WP_159723954.1 PilN domain-containing protein Machinery gene
  PY247_RS07110 (PY247_07110) - 1505955..1506681 (+) 727 Protein_1372 type 4a pilus biogenesis protein PilO -
  PY247_RS07115 (PY247_07115) pilP 1506685..1507212 (+) 528 WP_159723956.1 pilus assembly protein PilP Machinery gene
  PY247_RS07120 (PY247_07120) pilQ 1507229..1509406 (+) 2178 WP_159723957.1 type IV pilus secretin PilQ Machinery gene
  PY247_RS07125 (PY247_07125) aroK 1509426..1509983 (+) 558 WP_004657425.1 shikimate kinase AroK -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 23941.27 Da        Isoelectric Point: 6.9924

>NTDB_id=798215 PY247_RS07105 WP_159723954.1 1505308..1505958(+) (pilN) [Acinetobacter proteolyticus strain AP54]
MAKINLLPWRDELREQRKKQFVAFCVGVAALGVASVFSGWMYFDHKLNDQEQANQLIVSTNQNLDTQLKALDGLQERRNA
IIERMKLIQGLQGQRPITVRLVDELVRVTPPTMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
VDESKNKDKTTSSLVPRVEENYGSFVVTVDLGEIGTTAEAAATSEAAASGAVGVAK

Nucleotide


Download         Length: 651 bp        

>NTDB_id=798215 PY247_RS07105 WP_159723954.1 1505308..1505958(+) (pilN) [Acinetobacter proteolyticus strain AP54]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAACAAAGAAAGAAGCAGTTTGTCGCATTTTGTGTTGG
GGTTGCTGCATTAGGGGTTGCATCGGTATTTTCGGGATGGATGTATTTTGATCATAAACTTAATGATCAGGAACAAGCCA
ATCAATTGATTGTCAGTACTAATCAAAACTTAGATACGCAACTCAAAGCATTGGACGGTCTGCAAGAGCGCCGGAATGCC
ATTATTGAACGTATGAAACTGATCCAAGGTTTACAAGGACAACGTCCAATTACTGTCCGCTTGGTAGATGAGTTGGTTCG
CGTCACACCACCCACAATGTACTTAACTAAGTTTAGTCGTACTGGGGATAAATTCACGATTGAAGGTAAGGCAGAAAGTC
CGAATACCGTGGCTGAACTGTTACGTAATCTAGAGGCTTCACCTTGGTACCGTAATGCCTTTATGAATTCTTTCCTTGCC
GTGGATGAAAGCAAAAATAAAGACAAAACAACAAGTTCGTTGGTACCTCGCGTAGAGGAAAATTATGGCAGTTTTGTGGT
CACTGTAGATTTGGGTGAGATCGGGACAACTGCGGAAGCTGCAGCAACGTCAGAAGCAGCCGCATCAGGGGCAGTTGGGG
TGGCAAAATGA

Domains

Predicted by InterproScan.

Fimbrial assembly protein (PilN) (PilN)

(100-166)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A653K792

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Acinetobacter baumannii D1279779

77.465

98.611

0.764
  comN Acinetobacter baylyi ADP1

72.17

98.148

0.708