Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   PY824_RS08475 Genome accession   NZ_CP119172
Coordinates   1626476..1627477 (-) Length   333 a.a.
NCBI ID   WP_014295026.1    Uniprot ID   A0A380K089
Organism   Streptococcus macedonicus strain SGM CIP105683     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1621476..1632477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PY824_RS08460 (PY824_08460) thrS 1621751..1623697 (-) 1947 WP_014295023.1 threonine--tRNA ligase -
  PY824_RS08465 (PY824_08465) - 1624046..1625380 (-) 1335 WP_014295024.1 glycosyltransferase family 4 protein -
  PY824_RS08470 (PY824_08470) - 1625382..1626380 (-) 999 WP_014295025.1 glycosyltransferase family 4 protein -
  PY824_RS08475 (PY824_08475) ccpA 1626476..1627477 (-) 1002 WP_014295026.1 catabolite control protein A Regulator
  PY824_RS08480 (PY824_08480) - 1627806..1628891 (+) 1086 WP_014295027.1 Xaa-Pro peptidase family protein -
  PY824_RS08485 (PY824_08485) - 1628925..1629251 (-) 327 WP_014295028.1 multidrug efflux SMR transporter -
  PY824_RS08490 (PY824_08490) - 1629432..1629590 (+) 159 WP_342032628.1 MarR family winged helix-turn-helix transcriptional regulator -
  PY824_RS08495 (PY824_08495) - 1629797..1629925 (+) 129 WP_014295029.1 hypothetical protein -
  PY824_RS08500 (PY824_08500) - 1629959..1630222 (+) 264 WP_014295030.1 hypothetical protein -
  PY824_RS08505 (PY824_08505) - 1630348..1631025 (+) 678 WP_115265896.1 NAD(P)H-dependent oxidoreductase -
  PY824_RS08510 (PY824_08510) - 1631227..1632044 (-) 818 Protein_1615 family 1 glycosylhydrolase -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36532.53 Da        Isoelectric Point: 5.0350

>NTDB_id=798064 PY824_RS08475 WP_014295026.1 1626476..1627477(-) (ccpA) [Streptococcus macedonicus strain SGM CIP105683]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHRLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKEIAFVSGPLIDDINGKVRLAGYKEGLEKNGLSFKEGLVFEANYNYKDGFELAQRVINSG
STAAFVAEDELAAGLLNGLFEAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGLTTRGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=798064 PY824_RS08475 WP_014295026.1 1626476..1627477(-) (ccpA) [Streptococcus macedonicus strain SGM CIP105683]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCCCGAGAAGCAGGCGTCTCTATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAACGTAAAGGAAAACACACGTAAAAAAGTCCTTGAAGTTATTGACCGTTTGGATTATCGTCCAAATG
CCGTTGCCCGCGGTTTAGCAAGTAAAAAGACAACAACAGTAGGTGTTGTTATCCCTAATATTGCTAACAGCTATTTCTCA
ATTCTTGCTAAAGGGATTGATGATATTGCCGCTATGTACAAGTACAATATCGTACTTGCTTCAAGTGATGAAGATGATGA
TAAGGAAGTTAACGTTGTTAACACCTTGTTTGCTAAACAAGTTGATGGTATTATCTTCATGGGACATCGTTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTACTTGCGGGTACAGTTGACTTAGAACACCAACTCCCAAGT
GTTAATATTGACTACAAAGCAGCCGTTGCTGATGTTGTTGATATTTTGGCTAAAAATAATAAAGAAATCGCCTTTGTTTC
TGGTCCACTTATCGATGATATCAACGGTAAAGTGCGTTTAGCTGGTTACAAAGAAGGTCTTGAAAAAAATGGCTTATCGT
TCAAAGAAGGCCTTGTCTTTGAAGCTAATTACAACTATAAGGACGGATTTGAACTTGCACAACGTGTGATTAATTCTGGC
TCAACAGCAGCCTTTGTTGCCGAAGACGAATTGGCAGCAGGATTGTTGAATGGCTTGTTCGAAGCTGGCAAAAAAGTTCC
AGAAGACTTTGAAATCATCACAAGCAATGATTCACCAATCACATCATACACACGTCCAAACCTTAGCTCAATCAGCCAAC
CAGTTTATGACCTTGGTGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAGGAACTCGAAGAAAAAGAAATT
CTTCTTAATCACGGTCTTACAACACGTGGCACAACACGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A380K089

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.88

100

0.799

  ccpA Streptococcus pneumoniae D39

77.778

100

0.778

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553