Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   PX335_RS17465 Genome accession   NZ_CP118933
Coordinates   3634929..3635456 (-) Length   175 a.a.
NCBI ID   WP_002116864.1    Uniprot ID   A0AAN4MGG3
Organism   Acinetobacter pittii strain ML4     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3629929..3640456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PX335_RS17445 (PX335_17440) - 3630123..3630992 (-) 870 WP_017387052.1 hypothetical protein -
  PX335_RS17450 (PX335_17445) aroB 3631009..3632091 (-) 1083 WP_005067096.1 3-dehydroquinate synthase -
  PX335_RS17455 (PX335_17450) aroK 3632120..3632689 (-) 570 WP_002116987.1 shikimate kinase AroK -
  PX335_RS17460 (PX335_17455) pilQ 3632701..3634866 (-) 2166 WP_017387053.1 type IV pilus secretin PilQ Machinery gene
  PX335_RS17465 (PX335_17460) pilP 3634929..3635456 (-) 528 WP_002116864.1 pilus assembly protein PilP Machinery gene
  PX335_RS17470 (PX335_17465) pilO 3635467..3636219 (-) 753 WP_017387054.1 type 4a pilus biogenesis protein PilO Machinery gene
  PX335_RS17475 (PX335_17470) pilN 3636216..3636857 (-) 642 WP_017387055.1 PilN domain-containing protein Machinery gene
  PX335_RS17480 (PX335_17475) pilM 3636857..3637915 (-) 1059 WP_005067078.1 pilus assembly protein PilM Machinery gene

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19265.32 Da        Isoelectric Point: 9.0270

>NTDB_id=796524 PX335_RS17465 WP_002116864.1 3634929..3635456(-) (pilP) [Acinetobacter pittii strain ML4]
MKLKQFSLSILACLALAGCDSRIDAVNQQMADIRNQPPQAIEPAPVFTPVPQFNYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALESLNMKGSMRNSRGQVMALIQTPDQQIERVQVGNYIGMNQGRITHIGPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=796524 PX335_RS17465 WP_002116864.1 3634929..3635456(-) (pilP) [Acinetobacter pittii strain ML4]
ATGAAACTTAAACAATTTTCTCTTTCTATTTTGGCATGTTTAGCTTTAGCTGGATGCGACTCTAGAATCGATGCTGTAAA
TCAGCAAATGGCCGATATACGTAATCAGCCACCACAAGCCATAGAACCAGCGCCTGTTTTTACGCCTGTGCCACAATTTA
ATTATGCAGCCCATCAGTTAAAGAGCCCATTTTTACCAAGCTCACTTGCTGCTGAGCTCAAAATTATGGCGGGGAAACGA
GTATATCCGAATTTCTCACGTGCACCACAGCCACTCGAAAGCTATGCATTAGAGTCCTTAAATATGAAAGGAAGTATGCG
TAACAGCCGCGGGCAAGTCATGGCTCTGATCCAAACACCTGATCAACAAATTGAGCGAGTGCAGGTAGGGAACTATATCG
GGATGAATCAAGGTCGAATTACCCATATTGGTCCTACTCAGATTGATCTGGTGGAGATTGTCCCTGATGGGCGAGAAGGC
TATGTGGAGAGACCAAGAACCTTAGTGTTAATTGGACCCGCACCCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

88.571

100

0.886
  comL Acinetobacter baylyi ADP1

75.152

94.286

0.709