Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PXG99_RS12665 Genome accession   NZ_CP118911
Coordinates   2521748..2522701 (-) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain XRD006     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2516748..2527701
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXG99_RS12645 (PXG99_12645) - 2517627..2519051 (+) 1425 WP_017419270.1 MDR family MFS transporter -
  PXG99_RS12650 (PXG99_12650) - 2519093..2520037 (-) 945 WP_021495116.1 siderophore ABC transporter substrate-binding protein -
  PXG99_RS12655 (PXG99_12655) - 2520059..2520817 (-) 759 WP_012116804.1 ABC transporter ATP-binding protein -
  PXG99_RS12660 (PXG99_12660) - 2520811..2521758 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  PXG99_RS12665 (PXG99_12665) ceuB 2521748..2522701 (-) 954 WP_015239156.1 ABC transporter permease Machinery gene
  PXG99_RS12670 (PXG99_12670) - 2523115..2524479 (+) 1365 WP_015239155.1 aspartate kinase -
  PXG99_RS12675 (PXG99_12675) - 2524574..2524669 (+) 96 WP_021495118.1 YjcZ family sporulation protein -
  PXG99_RS12680 (PXG99_12680) phrC 2524817..2524936 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  PXG99_RS12685 (PXG99_12685) rapC 2524920..2526068 (-) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  PXG99_RS12690 (PXG99_12690) - 2526221..2527654 (-) 1434 WP_103042081.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=796251 PXG99_RS12665 WP_015239156.1 2521748..2522701(-) (ceuB) [Bacillus velezensis strain XRD006]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=796251 PXG99_RS12665 WP_015239156.1 2521748..2522701(-) (ceuB) [Bacillus velezensis strain XRD006]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTTGTCAAAGGCAGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCTCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536