Detailed information NTG0796120

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: PYV58_RS20580
• Genome accession: NZ_CP118892
• Coordinates: 4395517..4396932 (+)
• Length: 471 a.a.
• NCBI ID: WP_004818559.1
• Uniprot ID: -
• Organism: Acinetobacter sp. TAC-1
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 4390517..4401932

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYV58_RS20560 (PYV58_20560)	-	4391170..4391799 (-)	630	WP_034613562.1	hypothetical protein	-
PYV58_RS20565 (PYV58_20565)	pbpG	4391971..4393026 (-)	1056	WP_004718389.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
PYV58_RS20570 (PYV58_20570)	-	4393259..4393894 (+)	636	WP_004718392.1	response regulator	-
PYV58_RS20575 (PYV58_20575)	pilS	4393931..4395499 (+)	1569	WP_034613557.1	ATP-binding protein	Regulator
PYV58_RS20580 (PYV58_20580)	pilR	4395517..4396932 (+)	1416	WP_004818559.1	sigma-54 dependent transcriptional regulator	Regulator
PYV58_RS20585 (PYV58_20585)	-	4397136..4398314 (-)	1179	WP_034613554.1	S41 family peptidase	-
PYV58_RS20590 (PYV58_20590)	gpmI	4398345..4399892 (-)	1548	WP_034613550.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
PYV58_RS20595 (PYV58_20595)	lptG	4400047..4401117 (-)	1071	WP_034613546.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 471 a.a.
• Molecular weight: 53362.49 Da
• Isoelectric Point: 6.5046

>NTDB_id=796120 PYV58_RS20580 WP_004818559.1 4395517..4396932(+) (pilR) [Acinetobacter sp. TAC-1]
MTTRQPLVLLVDDEQDLCMLMQMSLSRMGIKTHMAHHLQQAKYFFSEYKYDACITDLNLPDGSGLDLVKHVSQHYPKTPI
AVLTAYGNMEIAIASLKAGAFDFVSKPINQLHLQQLLQKALHVPQLRETISDAPLEESMLIGDSQVIRKLRESIKKIARS
QAPVFITGESGTGKEVVANLIHLLSNRSDSPFVAINCGAISEELMESELFGHKKGCFSGATQDKQGLIQAANGGTLFLDE
IAELSLAMQAKLLRALQEKKIRPLGSDSEIEVDFRIISATHQDIEAFVEQGKFRHDLFFRIHVMDIVLPPLRERDCDILI
LANHFLQQICTEWRISTKSFTEQAKAFLLQQHYSGNVRELRNIIEKAITMSDEDYIDIQQLQPAPHRGVHKVEQHDLMQS
KALPIIMPNKAQNIPEEGLEQYLEKVEKEVLLSALNQTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTDDDE

Nucleotide

• Length: 1416 bp

>NTDB_id=796120 PYV58_RS20580 WP_004818559.1 4395517..4396932(+) (pilR) [Acinetobacter sp. TAC-1]
ATGACTACACGACAACCATTGGTTTTACTTGTAGATGATGAACAAGATTTATGTATGTTAATGCAAATGAGCCTTTCTCG
AATGGGCATCAAAACGCATATGGCACACCATTTACAACAAGCCAAATATTTTTTTAGTGAATATAAATATGATGCCTGTA
TTACCGATTTAAACCTCCCTGATGGTAGTGGTTTAGATTTGGTTAAACATGTATCGCAGCATTATCCTAAAACGCCTATT
GCAGTCTTAACTGCATATGGAAATATGGAAATTGCGATTGCCTCGCTGAAAGCAGGCGCTTTTGATTTTGTCAGCAAACC
GATTAACCAATTACATCTGCAACAACTTTTACAAAAAGCTTTGCATGTACCACAGTTAAGAGAAACGATCAGCGATGCGC
CGCTTGAGGAATCAATGCTCATCGGTGATTCACAGGTGATTCGTAAGTTAAGAGAATCGATTAAAAAAATTGCCCGGTCA
CAAGCACCCGTATTTATCACGGGTGAATCAGGAACAGGCAAAGAGGTTGTTGCCAACCTCATCCATCTACTCAGCAACCG
CAGTGATAGCCCTTTTGTTGCGATTAATTGTGGTGCAATTTCTGAAGAGCTGATGGAGAGTGAGCTATTTGGGCATAAAA
AAGGCTGCTTTTCAGGTGCAACTCAAGACAAACAGGGCCTTATTCAAGCTGCCAATGGTGGTACCCTGTTTTTAGATGAA
ATTGCAGAGCTGTCATTGGCGATGCAAGCCAAACTGTTACGGGCATTGCAAGAAAAGAAAATTCGTCCTCTAGGCAGTGA
TAGCGAAATCGAAGTTGATTTTCGTATTATCAGTGCAACACATCAAGACATTGAAGCATTCGTTGAACAAGGCAAATTCC
GCCATGATCTGTTCTTTAGAATTCATGTGATGGATATTGTCCTGCCGCCATTGCGCGAACGTGATTGTGATATTCTAATT
TTAGCCAATCATTTTCTTCAGCAAATTTGTACAGAGTGGCGTATTTCAACCAAGTCTTTCACTGAACAAGCCAAAGCTTT
TCTTTTGCAACAACATTACTCAGGCAATGTTCGTGAATTACGCAATATCATTGAAAAAGCCATTACCATGAGTGATGAAG
ACTATATTGATATTCAACAGCTACAACCAGCTCCACATCGTGGTGTCCACAAAGTCGAACAGCATGATCTGATGCAAAGT
AAAGCCTTGCCTATCATCATGCCGAATAAAGCACAAAACATTCCAGAAGAAGGTTTGGAGCAATATTTGGAAAAAGTTGA
AAAAGAAGTGTTGTTATCTGCATTAAATCAAACCCATTGGAATCGCACTTTAGCTGCGAAGAAATTGGGCATGACCTTTC
GTTCTTTACGTTACCGTTTGAAAAAGTTTGGTTTAGATACCGATGATGATGAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Response regulator receiver domain (Response_reg) (8-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	69.002	100	0.69
pilR	Pseudomonas aeruginosa PAK	47.835	98.089	0.469