Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PYV58_RS03605 Genome accession   NZ_CP118892
Coordinates   758225..758608 (+) Length   127 a.a.
NCBI ID   WP_004723803.1    Uniprot ID   A0A077L426
Organism   Acinetobacter sp. TAC-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 753225..763608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYV58_RS03590 (PYV58_03590) - 754277..755236 (+) 960 WP_034615984.1 DUF6160 family protein -
  PYV58_RS03595 (PYV58_03595) - 755334..757049 (-) 1716 WP_034615981.1 proline--tRNA ligase -
  PYV58_RS03600 (PYV58_03600) - 757299..757940 (-) 642 WP_004723804.1 hypothetical protein -
  PYV58_RS03605 (PYV58_03605) pilG 758225..758608 (+) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  PYV58_RS03610 (PYV58_03610) - 758634..759002 (+) 369 WP_004723801.1 response regulator -
  PYV58_RS03615 (PYV58_03615) - 759006..759542 (+) 537 WP_004723799.1 chemotaxis protein CheW -
  PYV58_RS03620 (PYV58_03620) - 759585..761654 (+) 2070 WP_004817697.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14227.30 Da        Isoelectric Point: 4.7172

>NTDB_id=796099 PYV58_RS03605 WP_004723803.1 758225..758608(+) (pilG) [Acinetobacter sp. TAC-1]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=796099 PYV58_RS03605 WP_004723803.1 758225..758608(+) (pilG) [Acinetobacter sp. TAC-1]
ATGGACGATAAATTTCAAAATCTAAAAGTCATGGTGATCGATGATTCTAAAACCATTCGTCGTACTGCTGAAACATTATT
ACAAAGAGAAGGTTGTGAAGTTGTCACTGCTGTAGACGGTTTTGAAGCCTTATCTAAAATTGCTGAAGCAAATCCAGATA
TTGTTTTTGTTGATATCATGATGCCTCGTCTGGATGGCTATCAAACCTGCGCTTTGATTAAAAACTCCCAAAATTATCAA
AATATTCCAGTCATCATGTTATCCAGTAAAGATGGCTTATTTGATCAAGCAAAAGGTCGTGTTGTCGGTTCAGATGAATA
TTTAACAAAACCATTTAGTAAAGATGAACTATTAAATGCTATTCGCAATCATGTGACTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077L426

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37