Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | HIY_RS09815 | Genome accession | NZ_AP022867 |
| Coordinates | 1940622..1940969 (-) | Length | 115 a.a. |
| NCBI ID | WP_005655981.1 | Uniprot ID | A0A0H3PPJ5 |
| Organism | Haemophilus influenzae strain 2018-Y40 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1935622..1945969
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HIY_RS09795 (HIY_19100) | bioB | 1936011..1937012 (-) | 1002 | WP_005655985.1 | biotin synthase BioB | - |
| HIY_RS09800 (HIY_19110) | thiQ | 1937125..1937772 (-) | 648 | WP_005655984.1 | thiamine ABC transporter ATP-binding protein | - |
| HIY_RS09805 (HIY_19120) | thiP | 1937756..1939372 (-) | 1617 | WP_005655983.1 | thiamine/thiamine pyrophosphate ABC transporter permease | - |
| HIY_RS09810 (HIY_19130) | thiB | 1939377..1940375 (-) | 999 | WP_005655982.1 | thiamine ABC transporter substrate binding subunit | - |
| HIY_RS09815 (HIY_19140) | comE1/comEA | 1940622..1940969 (-) | 348 | WP_005655981.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| HIY_RS09820 (HIY_19150) | ispH | 1941138..1942082 (-) | 945 | WP_005651634.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| HIY_RS09825 (HIY_19160) | lspA | 1942079..1942594 (-) | 516 | WP_005655980.1 | signal peptidase II | - |
| HIY_RS09830 (HIY_19170) | - | 1942664..1944223 (-) | 1560 | WP_032821875.1 | phosphoethanolamine transferase | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12369.19 Da Isoelectric Point: 8.0085
>NTDB_id=79575 HIY_RS09815 WP_005655981.1 1940622..1940969(-) (comE1/comEA) [Haemophilus influenzae strain 2018-Y40]
MKLMKTLFTSIVLCGALVVSSSFAEEKATEQTAQSVVTTQAEAQVAPAVVSDKLNINTATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNAEQLLEVQGIGKATLEKNRDRIIF
MKLMKTLFTSIVLCGALVVSSSFAEEKATEQTAQSVVTTQAEAQVAPAVVSDKLNINTATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNAEQLLEVQGIGKATLEKNRDRIIF
Nucleotide
Download Length: 348 bp
>NTDB_id=79575 HIY_RS09815 WP_005655981.1 1940622..1940969(-) (comE1/comEA) [Haemophilus influenzae strain 2018-Y40]
ATGAAATTAATGAAAACATTATTCACTTCGATTGTATTGTGTGGTGCACTGGTTGTTTCTTCGTCTTTTGCTGAGGAAAA
AGCGACAGAACAAACCGCTCAATCTGTTGTAACAACTCAAGCTGAAGCTCAAGTAGCACCAGCCGTAGTGAGCGATAAAT
TGAATATCAACACAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGCAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
ATGAAATTAATGAAAACATTATTCACTTCGATTGTATTGTGTGGTGCACTGGTTGTTTCTTCGTCTTTTGCTGAGGAAAA
AGCGACAGAACAAACCGCTCAATCTGTTGTAACAACTCAAGCTGAAGCTCAAGTAGCACCAGCCGTAGTGAGCGATAAAT
TGAATATCAACACAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGCAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
97.321 |
97.391 |
0.948 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
58.261 |
100 |
0.583 |
| comEA | Vibrio campbellii strain DS40M4 |
39.286 |
97.391 |
0.383 |