Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   PXH68_RS06375 Genome accession   NZ_CP118733
Coordinates   1384624..1385427 (-) Length   267 a.a.
NCBI ID   WP_205031778.1    Uniprot ID   A0AA96ZZP6
Organism   Streptococcus suivaginalis strain 29896     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1379624..1390427
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXH68_RS06355 (PXH68_06355) - 1380203..1380580 (-) 378 WP_205031775.1 OsmC family protein -
  PXH68_RS06360 (PXH68_06360) - 1380679..1381725 (-) 1047 WP_248028750.1 D-alanine--D-alanine ligase -
  PXH68_RS06365 (PXH68_06365) recR 1381807..1382403 (-) 597 WP_014637682.1 recombination mediator RecR -
  PXH68_RS06370 (PXH68_06370) pbp2b 1382412..1384484 (-) 2073 WP_248028751.1 penicillin-binding protein PBP2B -
  PXH68_RS06375 (PXH68_06375) vicX 1384624..1385427 (-) 804 WP_205031778.1 MBL fold metallo-hydrolase Regulator
  PXH68_RS06380 (PXH68_06380) micB 1385434..1386783 (-) 1350 WP_202848346.1 cell wall metabolism sensor histidine kinase VicK Regulator
  PXH68_RS06385 (PXH68_06385) micA 1386776..1387480 (-) 705 WP_202848347.1 response regulator YycF Regulator
  PXH68_RS06390 (PXH68_06390) - 1387656..1388417 (+) 762 WP_202848348.1 amino acid ABC transporter ATP-binding protein -
  PXH68_RS06395 (PXH68_06395) - 1388428..1389267 (+) 840 WP_248028752.1 transporter substrate-binding domain-containing protein -
  PXH68_RS06400 (PXH68_06400) - 1389282..1389980 (+) 699 WP_248028753.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29645.66 Da        Isoelectric Point: 6.4261

>NTDB_id=794638 PXH68_RS06375 WP_205031778.1 1384624..1385427(-) (vicX) [Streptococcus suivaginalis strain 29896]
MIGQGFNYSILASGSSGNCFYLETDKKKLLVDAGLSGKKITSLLAEIDRKPEDLDAIFVTHEHSDHIHGIGVLARKYGLD
IYANKETWQAMETKLGKIDVAQKHIFELGAMKTFGDLDIQSFGVSHDAANPQFYRFMKDNKSFVLLTDTGYVSDRMVGLV
ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNKTKKIYLGHLSKENNIKELAHLTMVNQL
AQADLGVGKDFHVFDTSPDTATALTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=794638 PXH68_RS06375 WP_205031778.1 1384624..1385427(-) (vicX) [Streptococcus suivaginalis strain 29896]
ATGATAGGACAGGGATTTAATTATAGTATTTTAGCTTCGGGATCGAGCGGCAACTGCTTCTATCTGGAAACTGATAAGAA
AAAACTCTTGGTTGATGCAGGGCTTTCCGGTAAAAAAATCACGAGTCTTTTGGCAGAAATTGATCGCAAACCAGAGGATT
TAGATGCCATCTTTGTGACACATGAACACAGCGACCACATCCATGGTATCGGCGTCCTTGCTCGAAAATACGGTTTGGAT
ATTTATGCCAACAAGGAGACTTGGCAGGCTATGGAGACCAAGTTGGGGAAAATCGATGTTGCCCAGAAGCATATCTTCGA
ACTCGGTGCCATGAAGACTTTTGGTGATTTGGATATCCAGTCTTTTGGCGTTAGCCACGATGCGGCCAATCCCCAGTTTT
ACCGTTTTATGAAGGACAACAAATCCTTTGTCCTCTTGACGGACACAGGTTATGTCAGTGACAGAATGGTTGGCTTGGTG
GAAAATGCGGATGCTTATTTGATTGAATCCAACCATGACATTGAGATCCTGCGTTCGGGTTCTTACTCTTGGAACCTCAA
GCAACGGATTTTATCTGACAAGGGCCACCTGTGCAACGAAGATGGGGCAGATGCTATGATTCGTTCCTTGGGCAATAAAA
CCAAGAAAATTTACCTTGGCCATCTTTCCAAGGAAAACAATATCAAGGAATTGGCCCATTTGACCATGGTCAATCAATTG
GCTCAGGCTGATTTAGGGGTGGGTAAAGACTTCCACGTCTTTGATACGTCCCCTGATACTGCGACAGCTTTAACCAAAAT
ATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-211)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.03

100

0.76