Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | HRS36_RS11275 | Genome accession | NZ_AP022839 |
| Coordinates | 2377152..2377697 (-) | Length | 181 a.a. |
| NCBI ID | WP_173237387.1 | Uniprot ID | A0A6F8T7H4 |
| Organism | Legionella antarctica strain TUM19329 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2372152..2382697
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRS36_RS11255 (TUM19329_22720) | aroK | 2373089..2373616 (-) | 528 | WP_018576163.1 | shikimate kinase AroK | - |
| HRS36_RS11260 (TUM19329_22730) | pilQ | 2373887..2376007 (-) | 2121 | WP_173237384.1 | type IV pilus secretin PilQ | Machinery gene |
| HRS36_RS11265 (TUM19329_22750) | pilP | 2376017..2376541 (-) | 525 | WP_173237385.1 | pilus assembly protein PilP | Machinery gene |
| HRS36_RS11270 (TUM19329_22760) | pilO | 2376538..2377137 (-) | 600 | WP_173237386.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| HRS36_RS11275 (TUM19329_22770) | pilN | 2377152..2377697 (-) | 546 | WP_173237387.1 | PilN domain-containing protein | Machinery gene |
| HRS36_RS11280 (TUM19329_22780) | pilM | 2377702..2378760 (-) | 1059 | WP_173237388.1 | type IV pilus assembly protein PilM | Machinery gene |
| HRS36_RS11285 (TUM19329_22790) | - | 2379086..2380159 (+) | 1074 | WP_173237389.1 | hypothetical protein | - |
| HRS36_RS11290 (TUM19329_22800) | - | 2380308..2382680 (+) | 2373 | WP_173237390.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 181 a.a. Molecular weight: 21133.64 Da Isoelectric Point: 10.1189
>NTDB_id=79304 HRS36_RS11275 WP_173237387.1 2377152..2377697(-) (pilN) [Legionella antarctica strain TUM19329]
MTQINLLPWREQKREQEKKVFTTILIASSVFAAFIVIIVNYYASELVSNQTSRNQILQKEINSLEAQIKEINALTLIRKA
LISRMSIVQNLQSTRTLMVHLFDELIQILPQGIYVTKLERKNDMVNLWGYSESNTNISILMRNIETNVWIQNPNLTEIKK
MDNKQPANNEFKLSFILKSKY
MTQINLLPWREQKREQEKKVFTTILIASSVFAAFIVIIVNYYASELVSNQTSRNQILQKEINSLEAQIKEINALTLIRKA
LISRMSIVQNLQSTRTLMVHLFDELIQILPQGIYVTKLERKNDMVNLWGYSESNTNISILMRNIETNVWIQNPNLTEIKK
MDNKQPANNEFKLSFILKSKY
Nucleotide
Download Length: 546 bp
>NTDB_id=79304 HRS36_RS11275 WP_173237387.1 2377152..2377697(-) (pilN) [Legionella antarctica strain TUM19329]
ATGACTCAAATCAACCTGCTTCCATGGCGTGAGCAAAAACGTGAGCAAGAAAAAAAGGTATTTACGACGATATTGATTGC
CAGTTCAGTTTTCGCAGCTTTTATTGTTATTATCGTGAATTACTATGCTTCTGAATTAGTAAGTAATCAAACCTCAAGAA
ATCAAATTTTGCAAAAAGAAATAAATTCATTGGAAGCTCAGATCAAGGAAATAAACGCTTTGACGCTAATCAGAAAAGCA
CTTATTTCCAGAATGTCTATAGTTCAGAATCTACAATCCACCAGAACGCTAATGGTTCATTTATTTGATGAATTAATCCA
AATATTGCCTCAGGGTATCTATGTTACTAAACTAGAAAGAAAGAATGACATGGTCAATCTTTGGGGGTATTCTGAATCGA
ATACAAATATCTCTATTTTAATGAGAAATATAGAAACTAATGTCTGGATTCAGAATCCCAATCTGACAGAGATTAAAAAA
ATGGATAATAAACAGCCTGCAAATAATGAATTTAAATTAAGTTTTATACTTAAATCTAAATACTAG
ATGACTCAAATCAACCTGCTTCCATGGCGTGAGCAAAAACGTGAGCAAGAAAAAAAGGTATTTACGACGATATTGATTGC
CAGTTCAGTTTTCGCAGCTTTTATTGTTATTATCGTGAATTACTATGCTTCTGAATTAGTAAGTAATCAAACCTCAAGAA
ATCAAATTTTGCAAAAAGAAATAAATTCATTGGAAGCTCAGATCAAGGAAATAAACGCTTTGACGCTAATCAGAAAAGCA
CTTATTTCCAGAATGTCTATAGTTCAGAATCTACAATCCACCAGAACGCTAATGGTTCATTTATTTGATGAATTAATCCA
AATATTGCCTCAGGGTATCTATGTTACTAAACTAGAAAGAAAGAATGACATGGTCAATCTTTGGGGGTATTCTGAATCGA
ATACAAATATCTCTATTTTAATGAGAAATATAGAAACTAATGTCTGGATTCAGAATCCCAATCTGACAGAGATTAAAAAA
ATGGATAATAAACAGCCTGCAAATAATGAATTTAAATTAAGTTTTATACTTAAATCTAAATACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
73.077 |
100 |
0.735 |