Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | HRS36_RS11270 | Genome accession | NZ_AP022839 |
| Coordinates | 2376538..2377137 (-) | Length | 199 a.a. |
| NCBI ID | WP_173237386.1 | Uniprot ID | A0A6F8T5F0 |
| Organism | Legionella antarctica strain TUM19329 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2371538..2382137
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRS36_RS11250 (TUM19329_22710) | aroB | 2371999..2373102 (-) | 1104 | WP_173237383.1 | 3-dehydroquinate synthase | - |
| HRS36_RS11255 (TUM19329_22720) | aroK | 2373089..2373616 (-) | 528 | WP_018576163.1 | shikimate kinase AroK | - |
| HRS36_RS11260 (TUM19329_22730) | pilQ | 2373887..2376007 (-) | 2121 | WP_173237384.1 | type IV pilus secretin PilQ | Machinery gene |
| HRS36_RS11265 (TUM19329_22750) | pilP | 2376017..2376541 (-) | 525 | WP_173237385.1 | pilus assembly protein PilP | Machinery gene |
| HRS36_RS11270 (TUM19329_22760) | pilO | 2376538..2377137 (-) | 600 | WP_173237386.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| HRS36_RS11275 (TUM19329_22770) | pilN | 2377152..2377697 (-) | 546 | WP_173237387.1 | PilN domain-containing protein | Machinery gene |
| HRS36_RS11280 (TUM19329_22780) | pilM | 2377702..2378760 (-) | 1059 | WP_173237388.1 | type IV pilus assembly protein PilM | Machinery gene |
| HRS36_RS11285 (TUM19329_22790) | - | 2379086..2380159 (+) | 1074 | WP_173237389.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22517.36 Da Isoelectric Point: 7.3138
>NTDB_id=79303 HRS36_RS11270 WP_173237386.1 2376538..2377137(-) (pilO) [Legionella antarctica strain TUM19329]
MNKINLSELTLDNIGQWPIPVKIGVILGVSILIVALGYWLIIKANFEQYANLQTKEVSLKSDFESKQHQASNLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIGAGLKFMLFAPQPEVEHDFYVELPIKITVTGSYMQLALFLSRVAEMNR
IVTLHEFSVEGLPSADKKIVAEDVLVMSITAKIYRYRTQ
MNKINLSELTLDNIGQWPIPVKIGVILGVSILIVALGYWLIIKANFEQYANLQTKEVSLKSDFESKQHQASNLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIGAGLKFMLFAPQPEVEHDFYVELPIKITVTGSYMQLALFLSRVAEMNR
IVTLHEFSVEGLPSADKKIVAEDVLVMSITAKIYRYRTQ
Nucleotide
Download Length: 600 bp
>NTDB_id=79303 HRS36_RS11270 WP_173237386.1 2376538..2377137(-) (pilO) [Legionella antarctica strain TUM19329]
ATGAATAAAATCAACCTCAGTGAACTAACCCTCGATAATATTGGTCAATGGCCAATACCTGTAAAAATTGGGGTTATTTT
GGGAGTCAGTATTTTAATTGTAGCACTTGGGTATTGGCTGATTATTAAAGCCAATTTTGAGCAATATGCTAATTTGCAGA
CAAAGGAAGTAAGTTTAAAGTCTGATTTCGAATCAAAACAGCATCAAGCATCTAACTTGCAAGCGTACCGCAATCAATTG
CAGTTAATGAATGAACGTTTTGGAACAATGCTGAAACAGCTTCCAGCAAAAAATGAAATGCCTGGTTTATTGGAAGAAAT
TTCTAAAACAGGAATAGGTGCAGGATTGAAATTTATGCTATTCGCCCCTCAACCTGAGGTGGAACATGATTTTTATGTTG
AATTACCAATAAAAATTACGGTAACAGGGAGTTACATGCAATTAGCCCTTTTCTTAAGCCGTGTCGCTGAAATGAATCGA
ATTGTCACCCTACATGAGTTTAGTGTTGAAGGATTGCCTTCCGCAGATAAGAAAATTGTCGCTGAGGATGTACTTGTGAT
GAGCATCACGGCTAAAATATATAGATATCGAACACAATGA
ATGAATAAAATCAACCTCAGTGAACTAACCCTCGATAATATTGGTCAATGGCCAATACCTGTAAAAATTGGGGTTATTTT
GGGAGTCAGTATTTTAATTGTAGCACTTGGGTATTGGCTGATTATTAAAGCCAATTTTGAGCAATATGCTAATTTGCAGA
CAAAGGAAGTAAGTTTAAAGTCTGATTTCGAATCAAAACAGCATCAAGCATCTAACTTGCAAGCGTACCGCAATCAATTG
CAGTTAATGAATGAACGTTTTGGAACAATGCTGAAACAGCTTCCAGCAAAAAATGAAATGCCTGGTTTATTGGAAGAAAT
TTCTAAAACAGGAATAGGTGCAGGATTGAAATTTATGCTATTCGCCCCTCAACCTGAGGTGGAACATGATTTTTATGTTG
AATTACCAATAAAAATTACGGTAACAGGGAGTTACATGCAATTAGCCCTTTTCTTAAGCCGTGTCGCTGAAATGAATCGA
ATTGTCACCCTACATGAGTTTAGTGTTGAAGGATTGCCTTCCGCAGATAAGAAAATTGTCGCTGAGGATGTACTTGTGAT
GAGCATCACGGCTAAAATATATAGATATCGAACACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
78.894 |
100 |
0.789 |
| pilO | Acinetobacter baumannii D1279779 |
39.474 |
95.477 |
0.377 |
| comO | Acinetobacter baylyi ADP1 |
38.83 |
94.472 |
0.367 |