Detailed information NTG0792125

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PV000_RS16545
• Genome accession: NZ_CP118354
• Coordinates: 3458954..3460057 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA20
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3453954..3465057

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PV000_RS16520 (PV000_16540)	-	3455831..3456217 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
PV000_RS16525 (PV000_16545)	-	3456225..3457358 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PV000_RS16530 (PV000_16550)	-	3457422..3457673 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PV000_RS16535 (PV000_16555)	coaD	3457728..3458237 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PV000_RS16540 (PV000_16560)	rsmD	3458258..3458878 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PV000_RS16545 (PV000_16565)	pilA	3458954..3460057 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PV000_RS16550 (PV000_16570)	-	3460104..3461702 (-)	1599	Protein_3245	CYTH and CHAD domain-containing protein	-
PV000_RS16555 (PV000_16580)	phnE	3461888..3462709 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PV000_RS16560 (PV000_16585)	phnE	3462706..3463575 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PV000_RS16565 (PV000_16590)	-	3463593..3464078 (-)	486	Protein_3248	phosphonate ABC transporter ATP-binding protein	-
PV000_RS16570 (PV000_16595)	-	3464072..3465022 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792125 PV000_RS16545 WP_023853086.1 3458954..3460057(+) (pilA) [Bordetella pertussis strain SA20]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792125 PV000_RS16545 WP_023853086.1 3458954..3460057(+) (pilA) [Bordetella pertussis strain SA20]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507