Detailed information NTG0792049

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: Q7618_RS09675
• Genome accession: NZ_CP131715
• Coordinates: 1873491..1874390 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2006C08-243
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1868491..1879390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7618_RS09650 (Q7618_09625)	rsmA	1868821..1869693 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
Q7618_RS09655 (Q7618_09630)	-	1869824..1870132 (-)	309	WP_000333257.1	hypothetical protein	-
Q7618_RS09660 (Q7618_09635)	-	1870125..1870766 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
Q7618_RS09665 (Q7618_09640)	-	1870768..1872798 (-)	2031	WP_000825257.1	bacteriocin-associated integral membrane family protein	-
Q7618_RS09670 (Q7618_09645)	-	1872875..1873171 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
Q7618_RS09675 (Q7618_09650)	comR	1873491..1874390 (-)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
Q7618_RS09680 (Q7618_09655)	rnmV	1874462..1875022 (-)	561	WP_000664448.1	ribonuclease M5	-
Q7618_RS09685 (Q7618_09660)	-	1875022..1875795 (-)	774	WP_000575638.1	TatD family hydrolase	-
Q7618_RS09690 (Q7618_09665)	-	1876100..1876993 (-)	894	Protein_1896	DUF1542 domain-containing protein	-
Q7618_RS09695 (Q7618_09670)	rpmH	1877277..1877411 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
Q7618_RS09700 (Q7618_09675)	-	1877556..1878770 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
Q7618_RS09705 (Q7618_09680)	-	1878926..1879220 (-)	295	Protein_1899	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=792049 Q7618_RS09675 WP_000904833.1 1873491..1874390(-) (comR) [Streptococcus pneumoniae strain 2006C08-243]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=792049 Q7618_RS09675 WP_000904833.1 1873491..1874390(-) (comR) [Streptococcus pneumoniae strain 2006C08-243]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361