Detailed information NTG0791806

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: Q7620_RS09700
• Genome accession: NZ_CP131713
• Coordinates: 1880631..1881530 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904833.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2008C09-276
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1875631..1886530

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7620_RS09675 (Q7620_09645)	rsmA	1875961..1876833 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
Q7620_RS09680 (Q7620_09650)	-	1876964..1877272 (-)	309	WP_000333257.1	hypothetical protein	-
Q7620_RS09685 (Q7620_09655)	-	1877265..1877906 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
Q7620_RS09690 (Q7620_09660)	-	1877908..1879938 (-)	2031	WP_000825257.1	bacteriocin-associated integral membrane family protein	-
Q7620_RS09695 (Q7620_09665)	-	1880015..1880311 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
Q7620_RS09700 (Q7620_09670)	comR	1880631..1881530 (-)	900	WP_000904833.1	helix-turn-helix transcriptional regulator	Regulator
Q7620_RS09705 (Q7620_09675)	rnmV	1881602..1882162 (-)	561	WP_000664448.1	ribonuclease M5	-
Q7620_RS09710 (Q7620_09680)	-	1882162..1882935 (-)	774	WP_000575638.1	TatD family hydrolase	-
Q7620_RS09715 (Q7620_09685)	-	1883240..1884133 (-)	894	Protein_1901	DUF1542 domain-containing protein	-
Q7620_RS09720 (Q7620_09690)	rpmH	1884417..1884551 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
Q7620_RS09725 (Q7620_09695)	-	1884696..1885910 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
Q7620_RS09730 (Q7620_09700)	-	1886066..1886360 (-)	295	Protein_1904	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35335.16 Da
• Isoelectric Point: 4.8989

>NTDB_id=791806 Q7620_RS09700 WP_000904833.1 1880631..1881530(-) (comR) [Streptococcus pneumoniae strain 2008C09-276]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=791806 Q7620_RS09700 WP_000904833.1 1880631..1881530(-) (comR) [Streptococcus pneumoniae strain 2008C09-276]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361