Detailed information NTG0791098

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: Q7626_RS09410
• Genome accession: NZ_CP131707
• Coordinates: 1852142..1853041 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904870.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2018C08-270
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1847142..1858041

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7626_RS09385 (Q7626_09370)	rsmA	1847472..1848344 (-)	873	WP_001216877.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
Q7626_RS09390 (Q7626_09375)	-	1848475..1848783 (-)	309	WP_000333257.1	hypothetical protein	-
Q7626_RS09395 (Q7626_09380)	-	1848776..1849417 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
Q7626_RS09400 (Q7626_09385)	-	1849419..1851449 (-)	2031	WP_000825278.1	bacteriocin-associated integral membrane family protein	-
Q7626_RS09405 (Q7626_09390)	-	1851526..1851822 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
Q7626_RS09410 (Q7626_09395)	comR	1852142..1853041 (-)	900	WP_000904870.1	helix-turn-helix transcriptional regulator	Regulator
Q7626_RS09415 (Q7626_09400)	rnmV	1853113..1853673 (-)	561	WP_000660015.1	ribonuclease M5	-
Q7626_RS09420 (Q7626_09405)	-	1853673..1854446 (-)	774	WP_000575621.1	TatD family hydrolase	-
Q7626_RS09425 (Q7626_09410)	-	1854742..1855440 (-)	699	WP_232036507.1	DUF1542 domain-containing protein	-
Q7626_RS09430 (Q7626_09415)	rpmH	1855679..1855813 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
Q7626_RS09435 (Q7626_09420)	-	1855958..1857172 (-)	1215	WP_341988675.1	pyridoxal phosphate-dependent aminotransferase	-
Q7626_RS09440 (Q7626_09425)	-	1857328..1857620 (-)	293	Protein_1847	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35351.12 Da
• Isoelectric Point: 4.8336

>NTDB_id=791098 Q7626_RS09410 WP_000904870.1 1852142..1853041(-) (comR) [Streptococcus pneumoniae strain 2018C08-270]
MLIGQKIKEIRIEKGVSRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=791098 Q7626_RS09410 WP_000904870.1 1852142..1853041(-) (comR) [Streptococcus pneumoniae strain 2018C08-270]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAGTTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	37.457	97.324	0.365
comR	Streptococcus suis 05ZYH33	37.457	97.324	0.365
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361