Detailed information NTG0079084

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: QMM10_RS09185
• Genome accession: NZ_AP025938
• Coordinates: 1816370..1817269 (-)
• Length: 299 a.a.
• NCBI ID: WP_050204738.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701057
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1811370..1822269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMM10_RS09165 (PC1044_17950)	rsmA	1812124..1812996 (-)	873	WP_001216869.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
QMM10_RS09170 (PC1044_17960)	-	1813127..1813435 (-)	309	WP_000333256.1	hypothetical protein	-
QMM10_RS09175 (PC1044_17970)	-	1813428..1814069 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
QMM10_RS09180 (PC1044_17980)	-	1814071..1816101 (-)	2031	WP_050102594.1	bacteriocin-associated integral membrane family protein	-
QMM10_RS09185 (PC1044_17990)	comR	1816370..1817269 (-)	900	WP_050204738.1	helix-turn-helix transcriptional regulator	Regulator
QMM10_RS09190 (PC1044_18000)	rnmV	1817341..1817901 (-)	561	WP_000660004.1	ribonuclease M5	-
QMM10_RS09195 (PC1044_18010)	-	1817901..1818674 (-)	774	WP_000575607.1	TatD family hydrolase	-
QMM10_RS09200	-	1818979..1819737 (-)	759	Protein_1806	DUF1542 domain-containing protein	-
QMM10_RS09205 (PC1044_18040)	rpmH	1819906..1820040 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
QMM10_RS09210 (PC1044_18050)	-	1820185..1821399 (-)	1215	WP_000666471.1	pyridoxal phosphate-dependent aminotransferase	-
QMM10_RS09215 (PC1044_18060)	-	1821555..1821848 (-)	294	WP_000977367.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35399.12 Da
• Isoelectric Point: 4.7732

>NTDB_id=79084 QMM10_RS09185 WP_050204738.1 1816370..1817269(-) (comR) [Streptococcus pneumoniae strain PZ900701057]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=79084 QMM10_RS09185 WP_050204738.1 1816370..1817269(-) (comR) [Streptococcus pneumoniae strain PZ900701057]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	38.095	98.328	0.375
comR	Streptococcus suis P1/7	37.457	97.324	0.365
comR	Streptococcus suis 05ZYH33	37.457	97.324	0.365
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365