Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | PotMrB4_RS05470 | Genome accession | NZ_AP022642 |
| Coordinates | 1162298..1163638 (-) | Length | 446 a.a. |
| NCBI ID | WP_044410357.1 | Uniprot ID | A0A0D6SA47 |
| Organism | Metapseudomonas otitidis strain MrB4 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1157298..1168638
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PotMrB4_RS05455 (PtoMrB4_10880) | - | 1157624..1160713 (+) | 3090 | WP_172432729.1 | pilus assembly protein | - |
| PotMrB4_RS05460 (PtoMrB4_10890) | - | 1160727..1161140 (+) | 414 | WP_172432730.1 | type IV pilin protein | - |
| PotMrB4_RS05465 (PtoMrB4_10900) | thiO | 1161191..1162285 (+) | 1095 | WP_172432731.1 | glycine oxidase ThiO | - |
| PotMrB4_RS05470 (PtoMrB4_10910) | pilR | 1162298..1163638 (-) | 1341 | WP_044410357.1 | sigma-54 dependent transcriptional regulator | Regulator |
| PotMrB4_RS05475 (PtoMrB4_10920) | pilS | 1163641..1165236 (-) | 1596 | WP_074973001.1 | PAS domain-containing sensor histidine kinase | Regulator |
| PotMrB4_RS05480 (PtoMrB4_10930) | - | 1165223..1165459 (-) | 237 | WP_172432732.1 | PP0621 family protein | - |
| PotMrB4_RS05485 (PtoMrB4_10940) | - | 1165606..1166604 (-) | 999 | WP_044410365.1 | outer membrane protein assembly factor BamD | - |
| PotMrB4_RS05490 (PtoMrB4_10950) | rluD | 1166752..1167723 (+) | 972 | WP_044410847.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| PotMrB4_RS05495 (PtoMrB4_10960) | pgeF | 1167723..1168448 (+) | 726 | WP_172432733.1 | peptidoglycan editing factor PgeF | - |
Sequence
Protein
Download Length: 446 a.a. Molecular weight: 49956.26 Da Isoelectric Point: 6.0001
>NTDB_id=79056 PotMrB4_RS05470 WP_044410357.1 1162298..1163638(-) (pilR) [Metapseudomonas otitidis strain MrB4]
MTRQRALIVDDEPDIRELLEITLGRMKLDTRSARNVKEAREWLAREPFDLCLTDMRLPDGTGQELVQYIQQRHPQVPVAM
ITAYGSLDTAINALKAGAFDFLTKPVDLGRLRELVATALRLRSGESDEEASVDSRLLGESPPMRALRNQIQKLARSQAPV
YISGESGSGKELVARLIHEQGPRASHPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAAHGGTLFLDEVADL
PLPMQVKLLRAIQEKAVRAVGGQQEVVVDVRILSATHKDLAAEVAAGRFRQDLFYRLNVIELGVPPLRERREDIPRLADV
MLKRLAEACSLPAATLTRDALEKLKTYRFPGNVRELENMLERAYTLCENDQIQPHDLRFTEAAGAAEGGEADLAKIDNLE
DYLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID
MTRQRALIVDDEPDIRELLEITLGRMKLDTRSARNVKEAREWLAREPFDLCLTDMRLPDGTGQELVQYIQQRHPQVPVAM
ITAYGSLDTAINALKAGAFDFLTKPVDLGRLRELVATALRLRSGESDEEASVDSRLLGESPPMRALRNQIQKLARSQAPV
YISGESGSGKELVARLIHEQGPRASHPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAAHGGTLFLDEVADL
PLPMQVKLLRAIQEKAVRAVGGQQEVVVDVRILSATHKDLAAEVAAGRFRQDLFYRLNVIELGVPPLRERREDIPRLADV
MLKRLAEACSLPAATLTRDALEKLKTYRFPGNVRELENMLERAYTLCENDQIQPHDLRFTEAAGAAEGGEADLAKIDNLE
DYLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID
Nucleotide
Download Length: 1341 bp
>NTDB_id=79056 PotMrB4_RS05470 WP_044410357.1 1162298..1163638(-) (pilR) [Metapseudomonas otitidis strain MrB4]
ATGACCCGACAGAGAGCCCTGATCGTCGACGACGAGCCCGATATCCGCGAACTGCTGGAGATCACCCTCGGCCGGATGAA
GCTGGATACCCGCAGCGCCCGCAACGTCAAGGAGGCCCGCGAGTGGCTGGCCCGCGAACCGTTCGACCTCTGCCTCACGG
ACATGCGCTTGCCCGATGGCACCGGGCAGGAGCTGGTGCAGTACATCCAGCAGCGGCACCCCCAGGTGCCGGTGGCCATG
ATCACGGCCTACGGCAGCCTGGACACTGCCATCAATGCCCTCAAGGCCGGAGCCTTCGACTTCCTGACCAAGCCAGTGGA
CCTTGGCCGTCTGCGCGAGCTGGTGGCGACTGCCCTGCGGCTGCGCAGCGGCGAGTCGGATGAAGAAGCCAGCGTCGACA
GCCGCCTGCTGGGCGAATCGCCCCCGATGCGGGCGTTGCGCAACCAGATCCAGAAGCTCGCCCGCAGCCAGGCGCCCGTC
TACATCAGCGGCGAGTCGGGCAGCGGCAAGGAGCTGGTCGCACGACTCATCCATGAGCAAGGCCCGCGCGCCAGTCACCC
CTTCGTGCCGGTGAACTGCGGTGCCATTCCATCGGAGCTGATGGAGAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCA
CCGGAGCCATCGAGGACAAGCAGGGCCTGTTCCAGGCTGCCCACGGCGGCACCCTGTTCCTCGACGAAGTGGCCGACCTG
CCGCTGCCCATGCAGGTCAAGCTGCTGCGGGCCATTCAGGAGAAGGCGGTACGCGCCGTCGGCGGCCAGCAGGAAGTGGT
GGTGGACGTGCGCATCCTCAGTGCCACTCACAAGGACCTGGCTGCCGAGGTGGCTGCCGGGCGATTCCGCCAGGACCTGT
TCTACCGGCTCAACGTGATCGAACTGGGGGTGCCGCCGTTGCGTGAGCGCCGCGAAGACATTCCCCGCCTGGCGGACGTG
ATGCTCAAGCGCCTGGCCGAAGCCTGCTCGCTGCCGGCCGCGACCCTTACCCGTGATGCGCTGGAGAAGCTCAAGACCTA
CCGCTTCCCCGGGAACGTGCGCGAGCTGGAGAACATGCTCGAGCGGGCCTACACCCTGTGCGAAAACGACCAGATCCAGC
CCCATGACCTGCGCTTCACCGAGGCTGCTGGCGCGGCAGAAGGCGGCGAGGCGGACCTCGCCAAGATCGACAACCTCGAG
GACTACCTCGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTGGAAGAGACCCGCTGGAACCGCACGGCAGCAGCCCA
GCGTCTTGGGCTGACCTTTCGTTCCATGCGTTACAGGCTGAAGAAACTGGGGATCGACTGA
ATGACCCGACAGAGAGCCCTGATCGTCGACGACGAGCCCGATATCCGCGAACTGCTGGAGATCACCCTCGGCCGGATGAA
GCTGGATACCCGCAGCGCCCGCAACGTCAAGGAGGCCCGCGAGTGGCTGGCCCGCGAACCGTTCGACCTCTGCCTCACGG
ACATGCGCTTGCCCGATGGCACCGGGCAGGAGCTGGTGCAGTACATCCAGCAGCGGCACCCCCAGGTGCCGGTGGCCATG
ATCACGGCCTACGGCAGCCTGGACACTGCCATCAATGCCCTCAAGGCCGGAGCCTTCGACTTCCTGACCAAGCCAGTGGA
CCTTGGCCGTCTGCGCGAGCTGGTGGCGACTGCCCTGCGGCTGCGCAGCGGCGAGTCGGATGAAGAAGCCAGCGTCGACA
GCCGCCTGCTGGGCGAATCGCCCCCGATGCGGGCGTTGCGCAACCAGATCCAGAAGCTCGCCCGCAGCCAGGCGCCCGTC
TACATCAGCGGCGAGTCGGGCAGCGGCAAGGAGCTGGTCGCACGACTCATCCATGAGCAAGGCCCGCGCGCCAGTCACCC
CTTCGTGCCGGTGAACTGCGGTGCCATTCCATCGGAGCTGATGGAGAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCA
CCGGAGCCATCGAGGACAAGCAGGGCCTGTTCCAGGCTGCCCACGGCGGCACCCTGTTCCTCGACGAAGTGGCCGACCTG
CCGCTGCCCATGCAGGTCAAGCTGCTGCGGGCCATTCAGGAGAAGGCGGTACGCGCCGTCGGCGGCCAGCAGGAAGTGGT
GGTGGACGTGCGCATCCTCAGTGCCACTCACAAGGACCTGGCTGCCGAGGTGGCTGCCGGGCGATTCCGCCAGGACCTGT
TCTACCGGCTCAACGTGATCGAACTGGGGGTGCCGCCGTTGCGTGAGCGCCGCGAAGACATTCCCCGCCTGGCGGACGTG
ATGCTCAAGCGCCTGGCCGAAGCCTGCTCGCTGCCGGCCGCGACCCTTACCCGTGATGCGCTGGAGAAGCTCAAGACCTA
CCGCTTCCCCGGGAACGTGCGCGAGCTGGAGAACATGCTCGAGCGGGCCTACACCCTGTGCGAAAACGACCAGATCCAGC
CCCATGACCTGCGCTTCACCGAGGCTGCTGGCGCGGCAGAAGGCGGCGAGGCGGACCTCGCCAAGATCGACAACCTCGAG
GACTACCTCGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTGGAAGAGACCCGCTGGAACCGCACGGCAGCAGCCCA
GCGTCTTGGGCTGACCTTTCGTTCCATGCGTTACAGGCTGAAGAAACTGGGGATCGACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
88.565 |
100 |
0.886 |
| pilR | Acinetobacter baumannii strain A118 |
50.327 |
100 |
0.518 |