Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   PUW49_RS01620 Genome accession   NZ_CP118054
Coordinates   307457..308503 (+) Length   348 a.a.
NCBI ID   WP_024052173.1    Uniprot ID   A0A412PNT0
Organism   Streptococcus anginosus strain VSI37     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 302457..313503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW49_RS01590 (PUW49_01590) tsaE 303829..304269 (+) 441 WP_024052179.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PUW49_RS01595 (PUW49_01595) - 304262..304783 (+) 522 WP_024052178.1 GNAT family N-acetyltransferase -
  PUW49_RS01600 (PUW49_01600) - 304791..305906 (+) 1116 WP_070241538.1 LCP family protein -
  PUW49_RS01605 (PUW49_01605) - 305953..306240 (-) 288 WP_024052176.1 hypothetical protein -
  PUW49_RS01610 (PUW49_01610) - 306250..306660 (-) 411 WP_024052175.1 HIT family protein -
  PUW49_RS01615 (PUW49_01615) pptA 306729..307460 (+) 732 WP_024052174.1 ABC transporter ATP-binding protein Regulator
  PUW49_RS01620 (PUW49_01620) pptB 307457..308503 (+) 1047 WP_024052173.1 ABC transporter permease Regulator
  PUW49_RS01625 (PUW49_01625) - 308554..309351 (+) 798 WP_070241539.1 phosphotransferase family protein -
  PUW49_RS01630 (PUW49_01630) trmB 309348..309983 (+) 636 WP_070815202.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PUW49_RS11025 - 310281..310468 (+) 188 Protein_281 dihydroxyacetone kinase transcriptional activator DhaS -
  PUW49_RS01635 (PUW49_01635) - 310610..311299 (+) 690 WP_070815205.1 VIT family protein -
  PUW49_RS01640 (PUW49_01640) rimP 311568..312038 (+) 471 WP_306806730.1 ribosome maturation factor RimP -
  PUW49_RS01645 (PUW49_01645) nusA 312087..313280 (+) 1194 WP_042754019.1 transcription termination factor NusA -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 41091.50 Da        Isoelectric Point: 10.4750

>NTDB_id=789651 PUW49_RS01620 WP_024052173.1 307457..308503(+) (pptB) [Streptococcus anginosus strain VSI37]
MRNLFQKRRQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPKNHLPIILALVVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWVLLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETMMALLFFQD
RVALLFMIGITLLLYFIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=789651 PUW49_RS01620 WP_024052173.1 307457..308503(+) (pptB) [Streptococcus anginosus strain VSI37]
ATGAGAAATCTGTTTCAAAAGCGCAGGCAAGTATTTCGCAATCAATGTTTGAAGTATTCACGCTATGTTTTTAATGACCA
TTTTGTCCTCTTTTTATTGGTCTTTATTGGCTTTTTAGCTGTTCAATACAGTCAACTGTTACGAAATTTTCCTAAAAATC
ACCTGCCAATCATTCTTGCTTTAGTGGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATCGCGACTTATATGGAAAAA
CCAGATAGTCTGTTTTTATTGGTCAAAGAAGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGTCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGTTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACTAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCCAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGAAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGCTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTGGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATGATGGCTTTGTTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATTGGAATTACATTGCTACTTTATTTCATCTATTTACCATTTAAATTAAGAAGTTTGGT
TGACTAA

Domains

Predicted by InterproScan.

Bacterial ABC transporter protein EcsB (EcsB)

(3-158)

Bacterial ABC transporter protein EcsB (EcsB)

(160-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A412PNT0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.563

100

0.486
  pptB Streptococcus salivarius strain HSISS4

47.701

100

0.477