Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PUW49_RS01615 Genome accession   NZ_CP118054
Coordinates   306729..307460 (+) Length   243 a.a.
NCBI ID   WP_024052174.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI37     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 301729..312460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW49_RS01585 (PUW49_01585) - 302302..303742 (+) 1441 Protein_271 NCS2 family permease -
  PUW49_RS01590 (PUW49_01590) tsaE 303829..304269 (+) 441 WP_024052179.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PUW49_RS01595 (PUW49_01595) - 304262..304783 (+) 522 WP_024052178.1 GNAT family N-acetyltransferase -
  PUW49_RS01600 (PUW49_01600) - 304791..305906 (+) 1116 WP_070241538.1 LCP family protein -
  PUW49_RS01605 (PUW49_01605) - 305953..306240 (-) 288 WP_024052176.1 hypothetical protein -
  PUW49_RS01610 (PUW49_01610) - 306250..306660 (-) 411 WP_024052175.1 HIT family protein -
  PUW49_RS01615 (PUW49_01615) pptA 306729..307460 (+) 732 WP_024052174.1 ABC transporter ATP-binding protein Regulator
  PUW49_RS01620 (PUW49_01620) pptB 307457..308503 (+) 1047 WP_024052173.1 ABC transporter permease Regulator
  PUW49_RS01625 (PUW49_01625) - 308554..309351 (+) 798 WP_070241539.1 phosphotransferase family protein -
  PUW49_RS01630 (PUW49_01630) trmB 309348..309983 (+) 636 WP_070815202.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PUW49_RS11025 - 310281..310468 (+) 188 Protein_281 dihydroxyacetone kinase transcriptional activator DhaS -
  PUW49_RS01635 (PUW49_01635) - 310610..311299 (+) 690 WP_070815205.1 VIT family protein -
  PUW49_RS01640 (PUW49_01640) rimP 311568..312038 (+) 471 WP_306806730.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26900.57 Da        Isoelectric Point: 4.7336

>NTDB_id=789650 PUW49_RS01615 WP_024052174.1 306729..307460(+) (pptA) [Streptococcus anginosus strain VSI37]
MLEIKGLIGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKVKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLVLTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=789650 PUW49_RS01615 WP_024052174.1 306729..307460(+) (pptA) [Streptococcus anginosus strain VSI37]
ATGTTAGAAATAAAAGGGCTTATAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGTTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAAGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACGGCTTATCGTAAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTATGAGGAATTAACGCTGCGCGAGCATATTGAAACGGTTGCTATGGCTTATGATGTGGAGCAAAA
GGTGGCTTTTGCACGCGTGGAAAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAGGGGATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTAGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGTAAAAGGCAAGTCAATTCTTAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGTTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.967

98.354

0.708
  pptA Streptococcus salivarius strain HSISS4

71.548

98.354

0.704