Detailed information NTG0078963

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: QML92_RS08945
• Genome accession: NZ_AP025937
• Coordinates: 1765385..1766284 (-)
• Length: 299 a.a.
• NCBI ID: WP_281956488.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700792
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1760385..1771284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QML92_RS08920 (PC0780_17540)	rsmA	1760715..1761587 (-)	873	WP_001216863.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
QML92_RS08925 (PC0780_17550)	-	1761718..1762026 (-)	309	WP_000333257.1	hypothetical protein	-
QML92_RS08930 (PC0780_17560)	-	1762019..1762660 (-)	642	WP_000565533.1	ABC transporter ATP-binding protein	-
QML92_RS08935 (PC0780_17570)	-	1762662..1764692 (-)	2031	WP_000825280.1	bacteriocin-associated integral membrane family protein	-
QML92_RS08940 (PC0780_17580)	-	1764769..1765065 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
QML92_RS08945 (PC0780_17590)	comR	1765385..1766284 (-)	900	WP_281956488.1	XRE family transcriptional regulator	Regulator
QML92_RS08950 (PC0780_17600)	rnmV	1766356..1766916 (-)	561	WP_281956489.1	ribonuclease M5	-
QML92_RS08955 (PC0780_17610)	-	1766916..1767689 (-)	774	WP_000575607.1	TatD family hydrolase	-
QML92_RS08960 (PC0780_17620)	-	1767995..1768684 (-)	690	WP_230738454.1	DUF1542 domain-containing protein	-
QML92_RS08965 (PC0780_17630)	rpmH	1768923..1769057 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
QML92_RS08970 (PC0780_17640)	-	1769202..1770416 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
QML92_RS08975 (PC0780_17650)	-	1770572..1770865 (-)	294	WP_000977365.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35293.08 Da
• Isoelectric Point: 4.8989

>NTDB_id=78963 QML92_RS08945 WP_281956488.1 1765385..1766284(-) (comR) [Streptococcus pneumoniae strain PZ900700792]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=78963 QML92_RS08945 WP_281956488.1 1765385..1766284(-) (comR) [Streptococcus pneumoniae strain PZ900700792]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTCTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	38.095	98.328	0.375
comR	Streptococcus suis P1/7	37.457	97.324	0.365
comR	Streptococcus suis 05ZYH33	37.457	97.324	0.365
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365