Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PUW70_RS10370 Genome accession   NZ_CP118029
Coordinates   2009428..2010195 (+) Length   255 a.a.
NCBI ID   WP_070672281.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI68     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2004428..2015195
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW70_RS10340 (PUW70_10340) comE 2004990..2005739 (-) 750 WP_024052478.1 competence system response regulator transcription factor ComE Regulator
  PUW70_RS10345 (PUW70_10345) comD/comD2 2005739..2007064 (-) 1326 WP_207047776.1 GHKL domain-containing protein Regulator
  PUW70_RS10350 (PUW70_10350) - 2007082..2007228 (-) 147 WP_003029519.1 bacteriocin -
  PUW70_RS10360 (PUW70_10360) rlmH 2007510..2007989 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PUW70_RS10365 (PUW70_10365) htrA 2008183..2009373 (+) 1191 WP_024052475.1 trypsin-like peptidase domain-containing protein Regulator
  PUW70_RS10370 (PUW70_10370) spo0J 2009428..2010195 (+) 768 WP_070672281.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29588.08 Da        Isoelectric Point: 9.3660

>NTDB_id=789274 PUW70_RS10370 WP_070672281.1 2009428..2010195(+) (spo0J) [Streptococcus anginosus strain VSI68]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELASSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNQWFDKILSQSLSVRQLEKQLHSQQTKTVTKNKHHLFLKEEEKRLKKIFGTEISLQFSKQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=789274 PUW70_RS10370 WP_070672281.1 2009428..2010195(+) (spo0J) [Streptococcus anginosus strain VSI68]
ATGGAAAAATATCAATATATCACACTTAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAGTTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGCTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTGATTGACAAAGGGTTGACACATAAAGAAATCGCTCTAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCCGTCCGGTTATTAAATTTACCTCTCAATATTATCGAAGCGATAAAAGAAGGAAATATTTCTCAGGGACACGCT
CGTCTGCTCATTAATCTCTCAGAAAAAGAGCAAAATCAGTGGTTTGATAAAATCTTATCTCAAAGCCTTTCAGTTCGACA
GCTAGAAAAACAATTACATTCCCAACAGACAAAAACTGTAACAAAAAATAAACATCATCTCTTCCTCAAAGAGGAAGAAA
AAAGATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTAAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.51

100

0.545