Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   PT671_RS14770 Genome accession   NZ_CP118021
Coordinates   2983913..2986237 (+) Length   774 a.a.
NCBI ID   WP_003220714.1    Uniprot ID   -
Organism   Bacillus spizizenii strain B-354     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2978913..2991237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT671_RS14740 pdeH 2980506..2981735 (+) 1230 WP_003220696.1 cyclic di-GMP phosphodiesterase -
  PT671_RS14745 - 2981711..2982079 (-) 369 WP_003220698.1 hypothetical protein -
  PT671_RS14750 - 2982194..2982310 (-) 117 WP_136975871.1 hypothetical protein -
  PT671_RS14755 degQ 2982542..2982682 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  PT671_RS14760 - 2982868..2983728 (+) 861 WP_003220710.1 polyprenyl synthetase family protein -
  PT671_RS14765 comX 2983741..2983905 (+) 165 WP_003220712.1 competence pheromone ComX -
  PT671_RS14770 comP 2983913..2986237 (+) 2325 WP_003220714.1 histidine kinase Regulator
  PT671_RS14775 comA 2986318..2986962 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  PT671_RS14780 - 2986978..2987358 (+) 381 WP_003220719.1 hotdog fold thioesterase -
  PT671_RS14785 mnhG 2987397..2987771 (-) 375 WP_003220721.1 monovalent cation/H(+) antiporter subunit G -
  PT671_RS14790 - 2987755..2988039 (-) 285 WP_003220724.1 Na(+)/H(+) antiporter subunit F1 -
  PT671_RS14795 - 2988039..2988515 (-) 477 WP_003220727.1 Na+/H+ antiporter subunit E -
  PT671_RS14800 - 2988521..2990002 (-) 1482 WP_003220728.1 Na+/H+ antiporter subunit D -
  PT671_RS14805 - 2989995..2990336 (-) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  PT671_RS14810 - 2990336..2990767 (-) 432 WP_003220732.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 774 a.a.        Molecular weight: 89526.81 Da        Isoelectric Point: 6.9518

>NTDB_id=789169 PT671_RS14770 WP_003220714.1 2983913..2986237(+) (comP) [Bacillus spizizenii strain B-354]
MKSWHNKISIFLIIISLVYVAYLTYISSNKLLVGATLEKNKANEVVITNIEEFSVAYDSGIEKGDIVKSIDNHEVNSSFN
VKKKINHASSIVVERDGKDLEVKFDVMNDSNFSTFLIPLIFYIVCLFCCFFILKINESKKLLSALILVIFLLSASLAYLS
AGGSAKGDLLSRCIMVFTLTTVLLNYLLFLHQYFKELGTILFSKKVFVLYFISIFNVAFELLRENLFFKDYVPKLNLLTF
LLIFIIVVVYFGVILYKNKDTEQAHVLKALTIINIISFLPFLCLYLIPYVFLNIQYVSSFLTASFMLLIPFSLVYQFMTN
KIYNVDFILSRLKYYGFLALTPTIILIVTFELLRRPEGDFYYIRLAVLIYIIMVAVFYYKEVLDFKFRLKRVSEKFNYQD
SIYKFTQLIRDSTSLSQVFEELKNTILEVSLVSRAYVYEVSADGSIKLYDNEAVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLARDLHDSVLQDLISLKRQCELFLADFKKDDNPCQEEVQDKLVQMNEQMSDVISMTRETCHELRP
QLLYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQASDVLIMLISIQNKIVLH
YEDDGVGFDQEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2325 bp        

>NTDB_id=789169 PT671_RS14770 WP_003220714.1 2983913..2986237(+) (comP) [Bacillus spizizenii strain B-354]
ATGAAATCTTGGCACAATAAAATTTCAATTTTCTTGATCATAATTAGTTTAGTCTATGTAGCTTATTTGACGTATATTAG
CTCTAACAAACTTCTAGTTGGAGCTACTCTTGAAAAAAATAAGGCTAACGAAGTCGTAATCACAAATATTGAAGAATTTT
CTGTTGCTTATGATTCTGGCATAGAAAAAGGCGATATCGTAAAAAGCATAGATAATCATGAAGTAAACAGTTCATTCAAT
GTTAAAAAGAAGATCAATCATGCCAGTTCAATAGTTGTTGAGCGAGATGGAAAAGATTTAGAAGTTAAGTTTGATGTAAT
GAATGATAGCAATTTTTCAACTTTTCTCATACCGTTAATTTTTTATATAGTGTGTCTATTTTGCTGTTTTTTCATACTAA
AGATAAATGAGTCAAAAAAATTGCTATCTGCTTTAATATTAGTCATTTTTCTTTTATCTGCATCTTTAGCATACTTAAGT
GCAGGAGGATCTGCTAAGGGTGATTTGTTAAGCAGATGTATTATGGTTTTTACTTTAACAACTGTGCTGCTTAACTACCT
TCTTTTTTTACATCAATATTTTAAAGAACTAGGCACTATATTATTCAGTAAGAAAGTTTTTGTTTTATATTTTATTTCTA
TATTTAATGTAGCTTTCGAATTATTGCGTGAAAATCTGTTTTTTAAAGACTATGTACCGAAATTAAACCTACTTACCTTT
TTGCTTATATTTATAATAGTAGTAGTATACTTTGGCGTTATTTTATACAAAAATAAAGATACTGAACAAGCGCATGTGTT
AAAAGCACTTACCATCATTAATATTATCTCTTTTTTGCCATTTTTGTGTTTATATTTGATTCCGTATGTGTTCTTAAACA
TACAGTATGTTTCTTCTTTTTTAACTGCTTCCTTTATGTTGCTTATACCTTTTTCTTTGGTTTATCAATTTATGACAAAT
AAAATTTATAATGTTGATTTTATTTTAAGTAGATTAAAGTATTATGGTTTTTTAGCATTGACACCAACAATTATTTTAAT
TGTTACATTTGAGTTATTGAGAAGGCCAGAGGGAGATTTTTATTATATTAGGCTTGCGGTTCTGATATATATTATTATGG
TGGCTGTTTTTTATTATAAAGAAGTACTTGATTTCAAATTTAGATTAAAAAGGGTCTCGGAAAAATTTAATTATCAAGAC
AGTATATATAAATTTACGCAGCTGATTAGAGACTCAACTTCCCTGTCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTCTCTCTTGTTAGCCGAGCATATGTATATGAAGTGTCAGCTGACGGAAGTATTAAACTATATGATAATGAGGCCG
TAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTCACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAGATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCCCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAATGTATCGATCGAAAATGTCATGAAAATCGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCAGTATGGCTCAAAAAACTCATGTACACGATCGAA
GAAAAACAACGTTCCGATCTCGCCCGCGATCTCCACGATTCCGTTCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGA
TTTAATTTCATTAAAACGACAGTGTGAGCTGTTTTTGGCTGATTTTAAGAAGGATGATAATCCGTGCCAGGAAGAGGTAC
AGGACAAGCTTGTACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCG
CAGCTTCTGTATGATCTTGGGCTGGTGAAGGCGCTGTCTAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACAT
CCGTTTAAATACCGGCAGATTTACGGCTTCGCTTGATCTGGATTCGCAGTTGAATTTGTACCGAATCATTCAAGAGTTTC
TGTCTAATGCGGTCAAGCACTCTCAGGCATCGGATGTGCTGATTATGCTCATCAGTATTCAAAATAAAATCGTTCTTCAT
TATGAGGACGATGGCGTAGGGTTTGATCAAGAAAAAAATAATGAACATTCCATGAGTATGGGGCTTTCTGGCATTAAGGA
GAGAGTCAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAAT
TGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(576-643)

PDZ domain (PDZ_2)

(34-103)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(684-770)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.618

100

0.581