Detailed information NTG0788911

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: PUN35_RS12725
• Genome accession: NZ_CP117986
• Coordinates: 2336753..2337901 (-)
• Length: 382 a.a.
• NCBI ID: WP_014475800.1
• Uniprot ID: A0A0D1KXJ1
• Organism: Bacillus sp. N3378-2at
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2331753..2342901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUN35_RS12695	yclO	2332466..2333413 (-)	948	WP_014475805.1	petrobactin ABC transporter permease YclO	-
PUN35_RS12700	ceuB	2333406..2334356 (-)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
PUN35_RS12705	-	2334747..2336111 (+)	1365	WP_014478832.1	aspartate kinase	-
PUN35_RS12710	-	2336264..2336377 (+)	114	WP_014478831.1	YjcZ family sporulation protein	-
PUN35_RS12715	-	2336459..2336548 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
PUN35_RS12720	phrC	2336647..2336769 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
PUN35_RS12725	rapC	2336753..2337901 (-)	1149	WP_014475800.1	response regulator aspartate phosphatase RapC	Regulator
PUN35_RS12730	yclK	2338064..2339485 (-)	1422	WP_072173981.1	two-component system sensor histidine kinase YclK	-
PUN35_RS12735	yclJ	2339472..2340155 (-)	684	WP_003246532.1	two-component system response regulator YclJ	-
PUN35_RS12740	-	2340368..2341828 (+)	1461	WP_014478827.1	ABC transporter permease	-
PUN35_RS12745	-	2341844..2342524 (+)	681	WP_014478826.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.65 Da
• Isoelectric Point: 4.9618

>NTDB_id=788911 PUN35_RS12725 WP_014475800.1 2336753..2337901(-) (rapC) [Bacillus sp. N3378-2at]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=788911 PUN35_RS12725 WP_014475800.1 2336753..2337901(-) (rapC) [Bacillus sp. N3378-2at]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

3D structure

• AlphaFold DB: A0A0D1KXJ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568