Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PUN35_RS12700 Genome accession   NZ_CP117986
Coordinates   2333406..2334356 (-) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus sp. N3378-2at     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2328406..2339356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUN35_RS12680 - 2329577..2330509 (-) 933 WP_014478835.1 restriction endonuclease -
  PUN35_RS12685 yclQ 2330739..2331692 (-) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  PUN35_RS12690 yclP 2331714..2332472 (-) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  PUN35_RS12695 yclO 2332466..2333413 (-) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  PUN35_RS12700 ceuB 2333406..2334356 (-) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  PUN35_RS12705 - 2334747..2336111 (+) 1365 WP_014478832.1 aspartate kinase -
  PUN35_RS12710 - 2336264..2336377 (+) 114 WP_014478831.1 YjcZ family sporulation protein -
  PUN35_RS12715 - 2336459..2336548 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  PUN35_RS12720 phrC 2336647..2336769 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  PUN35_RS12725 rapC 2336753..2337901 (-) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=788909 PUN35_RS12700 WP_014475804.1 2333406..2334356(-) (ceuB) [Bacillus sp. N3378-2at]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=788909 PUN35_RS12700 WP_014475804.1 2333406..2334356(-) (ceuB) [Bacillus sp. N3378-2at]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525