Detailed information NTG0788174

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: Q6379_RS09225
• Genome accession: NZ_CP130892
• Coordinates: 1752755..1753339 (+)
• Length: 194 a.a.
• NCBI ID: WP_003694238.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain NJ204705
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1747755..1758339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6379_RS09190 (Q6379_09190)	-	1748497..1748604 (+)	108	Protein_1775	IS5/IS1182 family transposase	-
Q6379_RS09195 (Q6379_09195)	-	1748685..1749473 (-)	789	WP_003689910.1	class I SAM-dependent methyltransferase	-
Q6379_RS09200 (Q6379_09200)	bioH	1749470..1750219 (-)	750	WP_010360850.1	pimeloyl-ACP methyl ester esterase BioH	-
Q6379_RS09205 (Q6379_09205)	-	1750218..1750943 (+)	726	WP_003689912.1	ComF family protein	-
Q6379_RS09210 (Q6379_09210)	trmL	1751008..1751472 (+)	465	WP_003689916.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
Q6379_RS09215 (Q6379_09215)	-	1751600..1752286 (+)	687	WP_003696139.1	septal ring lytic transglycosylase RlpA family protein	-
Q6379_RS09220 (Q6379_09220)	-	1752347..1752673 (+)	327	WP_003689921.1	PepSY domain-containing protein	-
Q6379_RS09225 (Q6379_09225)	ruvA	1752755..1753339 (+)	585	WP_003694238.1	Holliday junction branch migration protein RuvA	Machinery gene
Q6379_RS09230 (Q6379_09230)	-	1753339..1753476 (+)	138	WP_003689926.1	hypothetical protein	-
Q6379_RS09235 (Q6379_09235)	-	1753502..1755358 (+)	1857	WP_003689927.1	ABC transporter ATP-binding protein	-
Q6379_RS09240 (Q6379_09240)	rsgA	1755363..1756286 (+)	924	WP_003689928.1	ribosome small subunit-dependent GTPase A	-
Q6379_RS09245 (Q6379_09245)	-	1756399..1756623 (+)	225	WP_003689929.1	exodeoxyribonuclease VII small subunit	-
Q6379_RS09250 (Q6379_09250)	-	1756607..1757503 (+)	897	WP_003691917.1	polyprenyl synthetase family protein	-
Q6379_RS09255 (Q6379_09255)	-	1757620..1757919 (-)	300	WP_010359269.1	DUF2818 family protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20829.12 Da
• Isoelectric Point: 7.2073

>NTDB_id=788174 Q6379_RS09225 WP_003694238.1 1752755..1753339(+) (ruvA) [Neisseria gonorrhoeae strain NJ204705]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDRLFAASPAADETEDIVSTLLA
LGYNEREAKAAVKGVPKGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=788174 Q6379_RS09225 WP_003694238.1 1752755..1753339(+) (ruvA) [Neisseria gonorrhoeae strain NJ204705]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGTTATGA
AGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAGACCTTCCGCCAACTGATTAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAGCTGGCGCGGGCGGTTGCAGAAGAAGATGT
CAAACGCCTCTCCTCCGCTCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACAGGCTGTTTGCCGCCTCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAACGAACGCGAGGCAAAAGCGGCGGTCAAAGGCGTTCCGAAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCCCTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA N terminal domain (RuvA_N) (1-62)

• RuvA, C-terminal domain (RuvA_C) (150-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	37.5	100	0.387
ruvA	Streptococcus pneumoniae R6	37.5	100	0.387
ruvA	Streptococcus pneumoniae D39	37.5	100	0.387
ruvA	Bacillus subtilis subsp. subtilis str. 168	34.951	100	0.371