Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PO845_RS02090 Genome accession   NZ_CP117857
Coordinates   435792..436745 (+) Length   317 a.a.
NCBI ID   WP_061890422.1    Uniprot ID   -
Organism   Bacillus velezensis strain PT4     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 430792..441745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO845_RS02065 (PO845_02065) - 430838..432271 (+) 1434 WP_162492834.1 HAMP domain-containing sensor histidine kinase -
  PO845_RS02070 (PO845_02070) rapC 432424..433572 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  PO845_RS02075 (PO845_02075) phrC 433556..433675 (+) 120 WP_031378677.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  PO845_RS02080 (PO845_02080) - 433824..433919 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  PO845_RS02085 (PO845_02085) - 434014..435378 (-) 1365 WP_280955768.1 aspartate kinase -
  PO845_RS02090 (PO845_02090) ceuB 435792..436745 (+) 954 WP_061890422.1 ABC transporter permease Machinery gene
  PO845_RS02095 (PO845_02095) - 436735..437682 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  PO845_RS02100 (PO845_02100) - 437676..438434 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  PO845_RS02105 (PO845_02105) - 438456..439400 (+) 945 WP_007410275.1 siderophore ABC transporter substrate-binding protein -
  PO845_RS02110 (PO845_02110) - 439442..440866 (-) 1425 WP_033575079.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34931.21 Da        Isoelectric Point: 9.6741

>NTDB_id=788014 PO845_RS02090 WP_061890422.1 435792..436745(+) (ceuB) [Bacillus velezensis strain PT4]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFSSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=788014 PO845_RS02090 WP_061890422.1 435792..436745(+) (ceuB) [Bacillus velezensis strain PT4]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTTCGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536