Detailed information NTG0787171

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG736_RS16205
• Genome accession: NZ_CP130718
• Coordinates: 3624291..3625580 (-)
• Length: 429 a.a.
• NCBI ID: WP_020127826.1
• Uniprot ID: A0A6M4WMS1
• Organism: Streptomyces sp. NBC_01334
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3619291..3630580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG736_RS16195 (OG736_16180)	-	3620468..3623092 (-)	2625	WP_327183076.1	valine--tRNA ligase	-
OG736_RS16200 (OG736_16185)	-	3623229..3624215 (+)	987	WP_327183077.1	hypothetical protein	-
OG736_RS16205 (OG736_16190)	clpX	3624291..3625580 (-)	1290	WP_020127826.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG736_RS16210 (OG736_16195)	clpP	3625762..3626442 (-)	681	WP_020127827.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG736_RS16215 (OG736_16200)	clpP	3626828..3627433 (-)	606	WP_028806515.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG736_RS16220 (OG736_16205)	tig	3627948..3629321 (-)	1374	WP_327183078.1	trigger factor	-
OG736_RS16235 (OG736_16220)	-	3630000..3630194 (-)	195	WP_030779494.1	hypothetical protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46908.76 Da
• Isoelectric Point: 4.7788

>NTDB_id=787171 OG736_RS16205 WP_020127826.1 3624291..3625580(-) (clpX) [Streptomyces sp. NBC_01334]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIETRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=787171 OG736_RS16205 WP_020127826.1 3624291..3625580(-) (clpX) [Streptomyces sp. NBC_01334]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTGGGCCAGGAGCCC
GCCAAGAAGGCCCTGTCGGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACCGGCTCGGGCAAGACCCTCCTGGCCCAGA
CCCTGGCGCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACGGCGCTGACCGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCGCGGAAGAGCGAGAACCCCTCCATCACCCGTGACGTGTCGGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCGGGCCTGGAGAAGATCATCGAGACCCGGGCCGGCGC
CAAGGGCATCGGGTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTGCAGATCCTGATCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGGCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGGGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCGATCATGGAGGAAGTCCTCCAGGCGGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCGGACGTGGTCCTCTCCAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGCGGCGGTCGCGGCCCGGGCGAGCAGAA
GACCGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A6M4WMS1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.706	0.587
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	95.804	0.522