Detailed information NTG0787082

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHB58_RS15815
• Genome accession: NZ_CP130716
• Coordinates: 3531759..3533051 (-)
• Length: 430 a.a.
• NCBI ID: WP_371652718.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00150
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3526759..3538051

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB58_RS15805 (OHB58_15755)	-	3527983..3530607 (-)	2625	WP_371652716.1	valine--tRNA ligase	-
OHB58_RS15810 (OHB58_15760)	-	3530747..3531685 (+)	939	WP_371652717.1	hypothetical protein	-
OHB58_RS15815 (OHB58_15765)	clpX	3531759..3533051 (-)	1293	WP_371652718.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHB58_RS15820 (OHB58_15770)	clpP	3533208..3533885 (-)	678	WP_306822805.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB58_RS15825 (OHB58_15775)	clpP	3533967..3534584 (-)	618	WP_361386536.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB58_RS15830 (OHB58_15780)	tig	3534917..3536305 (-)	1389	WP_371652719.1	trigger factor	-
OHB58_RS15845 (OHB58_15795)	-	3536913..3537107 (-)	195	WP_101388310.1	hypothetical protein	-
OHB58_RS15850 (OHB58_15800)	-	3537236..3537673 (-)	438	WP_371652720.1	HD domain-containing protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47100.96 Da
• Isoelectric Point: 4.8809

>NTDB_id=787082 OHB58_RS15815 WP_371652718.1 3531759..3533051(-) (clpX) [Streptomyces sp. NBC_00150]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVHNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=787082 OHB58_RS15815 WP_371652718.1 3531759..3533051(-) (clpX) [Streptomyces sp. NBC_00150]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGTCCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTGGAGAGCTACGTGGTGGGCCAGGAGCCC
GCCAAGAAGGCGCTCTCCGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGGACGGGCCG
TGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CCCTCGCCCGGATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCGGGGTACGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TCCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTGCCCGTCCTCACCTCGGTCCACAACCTCGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACGGGGGCGCGCGGTCTGC
GCGCGATCATGGAGGAAGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGACGTCGTCCACAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCATCGTGAAGAACGACGGGCGGCACGA
GAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.488	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512