Detailed information NTG0786914

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG202_RS17385
• Genome accession: NZ_CP130714
• Coordinates: 3966209..3967495 (-)
• Length: 428 a.a.
• NCBI ID: WP_005479362.1
• Uniprot ID: A0A8I0P6X2
• Organism: Streptomyces sp. NBC_00310
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3961209..3972495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG202_RS17375 (OG202_17385)	-	3962325..3964955 (-)	2631	WP_327729710.1	valine--tRNA ligase	-
OG202_RS17380 (OG202_17390)	-	3965093..3966043 (+)	951	WP_327729709.1	hypothetical protein	-
OG202_RS17385 (OG202_17395)	clpX	3966209..3967495 (-)	1287	WP_005479362.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG202_RS17390 (OG202_17400)	clpP	3967699..3968379 (-)	681	WP_326582804.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG202_RS17395 (OG202_17405)	clpP	3968522..3969130 (-)	609	WP_189709844.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG202_RS17400 (OG202_17410)	tig	3969535..3970926 (-)	1392	WP_326582803.1	trigger factor	-
OG202_RS17415 (OG202_17425)	-	3971555..3971749 (-)	195	WP_033526477.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46886.74 Da
• Isoelectric Point: 4.8317

>NTDB_id=786914 OG202_RS17385 WP_005479362.1 3966209..3967495(-) (clpX) [Streptomyces sp. NBC_00310]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIN
ADVVRSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=786914 OG202_RS17385 WP_005479362.1 3966209..3967495(-) (clpX) [Streptomyces sp. NBC_00310]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCG
GCCAAGAAAGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGTCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGAAAGAGCGAGAACCCCTCGATCACGCGCGACGTGTCGGGTGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAAGGCACCACGGCGTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGAGGGCGGGAGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAACTCGAATCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCATCGAGCCCCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTGATGTCGGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGAGTCGTCATCAAC
GCCGACGTGGTCCGCTCCAACGTCAACCCGACCCTGATTCCGCGGGACGCCCGCGGCCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A8I0P6X2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521