Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PGW99_RS08640 Genome accession   NZ_CP117520
Coordinates   1797502..1797885 (-) Length   127 a.a.
NCBI ID   WP_273777275.1    Uniprot ID   -
Organism   Acinetobacter sp. GSS19     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1792502..1802885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PGW99_RS08625 - 1794825..1796516 (-) 1692 WP_273777272.1 methyl-accepting chemotaxis protein -
  PGW99_RS08630 - 1796564..1797100 (-) 537 WP_273777273.1 chemotaxis protein CheW -
  PGW99_RS08635 - 1797104..1797472 (-) 369 WP_273777274.1 response regulator -
  PGW99_RS08640 pilG 1797502..1797885 (-) 384 WP_273777275.1 twitching motility response regulator PilG Regulator
  PGW99_RS08645 - 1798171..1798815 (+) 645 WP_273777276.1 hypothetical protein -
  PGW99_RS08650 - 1799078..1800793 (+) 1716 WP_273777277.1 proline--tRNA ligase -
  PGW99_RS08655 dcd 1800855..1801424 (-) 570 WP_273777278.1 dCTP deaminase -
  PGW99_RS08660 - 1801699..1802259 (+) 561 WP_273777279.1 DUF2062 domain-containing protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14299.41 Da        Isoelectric Point: 4.7381

>NTDB_id=786230 PGW99_RS08640 WP_273777275.1 1797502..1797885(-) (pilG) [Acinetobacter sp. GSS19]
MEEKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAETNPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=786230 PGW99_RS08640 WP_273777275.1 1797502..1797885(-) (pilG) [Acinetobacter sp. GSS19]
ATGGAAGAAAAATTTCAAAATCTAAAAGTCATGGTAATCGATGATTCAAAAACCATTCGCCGTACAGCAGAAACCTTGTT
GCAACGTGAAGGATGTGAGGTCATCACTGCCGTTGATGGTTTTGAAGCACTTTCAAAAATTGCCGAAACAAATCCTGATA
TCGTATTTGTGGATATTATGATGCCGCGTTTAGATGGTTATCAAACTTGTGCATTAATTAAAAACTCACAAAACTACCAA
AATATCCCAGTGATTATGTTGTCGAGTAAAGACGGCTTGTTTGACCAAGCCAAAGGGCGAGTGGTCGGTTCAGATGAATA
TTTGACCAAGCCATTTAGTAAAGATGAATTGTTAAACGCAATACGTAACCACGTCACCGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37