Detailed information NTG0785447

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PSH92_RS19825
• Genome accession: NZ_CP117451
• Coordinates: 4570034..4572280 (-)
• Length: 748 a.a.
• NCBI ID: WP_305467887.1
• Uniprot ID: -
• Organism: Pseudomonas beijingensis strain FP2034
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4565034..4577280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSH92_RS19790 (PSH92_19785)	murB	4565418..4566437 (-)	1020	WP_122565899.1	UDP-N-acetylmuramate dehydrogenase	-
PSH92_RS19795 (PSH92_19790)	-	4566434..4566898 (-)	465	WP_122565900.1	low molecular weight protein-tyrosine-phosphatase	-
PSH92_RS19800 (PSH92_19795)	kdsB	4566898..4567662 (-)	765	WP_122565901.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PSH92_RS19805 (PSH92_19800)	-	4567659..4567844 (-)	186	WP_003179363.1	Trm112 family protein	-
PSH92_RS19810 (PSH92_19805)	lpxK	4567868..4568878 (-)	1011	WP_122565902.1	tetraacyldisaccharide 4'-kinase	-
PSH92_RS19815 (PSH92_19810)	-	4568878..4569306 (-)	429	WP_053123850.1	biopolymer transporter ExbD	-
PSH92_RS19820 (PSH92_19815)	exbB	4569303..4569938 (-)	636	WP_025214875.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PSH92_RS19825 (PSH92_19820)	comA	4570034..4572280 (-)	2247	WP_305467887.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PSH92_RS19830 (PSH92_19825)	-	4572425..4572940 (+)	516	WP_122565904.1	DUF2062 domain-containing protein	-
PSH92_RS19835 (PSH92_19830)	-	4573119..4573898 (-)	780	WP_041476072.1	ABC transporter permease	-
PSH92_RS19840 (PSH92_19835)	-	4573901..4574833 (-)	933	WP_122565905.1	ABC transporter ATP-binding protein	-
PSH92_RS19845 (PSH92_19840)	-	4574969..4575592 (-)	624	WP_122565983.1	glutathione S-transferase family protein	-
PSH92_RS19850 (PSH92_19845)	-	4575637..4576296 (-)	660	WP_305467889.1	transglutaminase family protein	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 81094.29 Da
• Isoelectric Point: 9.8421

>NTDB_id=785447 PSH92_RS19825 WP_305467887.1 4570034..4572280(-) (comA) [Pseudomonas beijingensis strain FP2034]
MRTGLVALALGLVAPIFLPALPPLWLIAAMPVLALMALPFRTYAAGFFLFGLAWACLSAQWALDNRLPAALDGETRWVEG
RVVGLPQQGDGVVRFELADAHSRRTRLPTTMRLAWFGGPPVNSGERWRLAVKLKRPAGLLNPHGFDYAAWLLSRGIGATG
TVKEGRLLQAARGAWRDEVRQALAQVDTHGRSGALAALVLGDGGGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARYGLWPTGLAWLPWACALAFCAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKQPDPWWAWLLAFVGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVAVGLCPLLLIVGLPVSLSGPLVNLLAVPWISLLVLPPAL
LGTALLPVPLIGEGLLWIAGGLLDLLFKGLGLMAGRMPAWVPVAVPPWALGIAALGAFLLLLPKGVPLRVLGWPMMLLMV
FPPREHLPQGHAEVWQLDVGQGLAVLVRTRHHSLLYDAGPRFGEADVGERVVLPTLRKLGVRGLDLMLLSHADADHAGGA
LAVRKGLPTMEVISGDPDALPDELQAGPCDSGRRWEWDGVGFELWRWASAVESNQKSCVLLVEAGGERLLLTGDIDTPAE
RALLDEALALPIQWLAAPHHGSRSSSSMALLSRLKPHSVLISRGQGNAFGHPHPQVMARYRRLGLATYDSAEQGAIRLQL
GAFELPRTEAGHRRYWRDPPAVGTPRQH

Nucleotide

• Length: 2247 bp

>NTDB_id=785447 PSH92_RS19825 WP_305467887.1 4570034..4572280(-) (comA) [Pseudomonas beijingensis strain FP2034]
ATGCGCACAGGGTTAGTCGCGCTTGCACTGGGGCTGGTGGCCCCGATTTTTTTACCGGCACTGCCGCCGTTGTGGCTGAT
TGCAGCCATGCCGGTGCTGGCATTGATGGCGTTGCCATTTCGAACCTACGCGGCGGGTTTTTTCCTGTTCGGGCTGGCCT
GGGCCTGCCTGTCGGCGCAGTGGGCGCTGGACAATCGATTACCCGCCGCCCTGGACGGAGAAACCCGTTGGGTTGAAGGG
CGCGTCGTCGGTTTGCCGCAACAGGGCGACGGCGTGGTGCGCTTCGAACTGGCCGATGCCCATTCACGTCGTACCCGATT
ACCGACAACGATGCGCCTCGCCTGGTTCGGTGGCCCGCCCGTCAACAGCGGCGAACGCTGGCGATTGGCAGTGAAGCTCA
AGCGGCCTGCCGGGCTGCTGAACCCGCACGGCTTCGACTATGCCGCCTGGTTGTTGAGCCGTGGCATTGGCGCGACCGGT
ACCGTCAAGGAGGGGCGTCTGCTGCAAGCAGCCCGGGGCGCCTGGCGTGACGAGGTGCGCCAGGCGCTGGCACAGGTCGA
CACCCACGGCCGCTCCGGTGCGCTGGCGGCATTGGTCCTGGGCGACGGGGGTGGGCTGAGCCGCGAGGACTGGCAGGTTT
TGCAAGACACCGGCACGGTCCATTTGCTGGTGATCTCCGGGCAACACATCGGCCTGCTCGCCGGCCTGGTGTACCTGTTG
GTGGCCGGTGCGGCGCGTTATGGCCTGTGGCCGACGGGGCTGGCGTGGTTGCCTTGGGCGTGTGCGCTGGCCTTTTGCGC
CGCCCTGGGCTACGGCCTGCTCGCCGGTTTCGAGGTGCCGGTGCGACGGGCCTGCGCGATGATCGGCCTGGTGTTGCTGT
GGCGCTTGCGCTTCAAACAGCCGGATCCGTGGTGGGCATGGCTGCTGGCCTTCGTCGGGGTGCTGGTGTTCGACCCGCTC
GCCAGCCTGCGGCCGGGGTTCTGGTTGTCGTTTGCGGCCGTCGCCATATTGATGTTCACCTTTGGCGCTCGCCTTGGGCC
CTGGCGCTGGTGGCAAACCTGGACCCGTGCCCAGTGGCTGGTTGCGGTCGGCCTGTGTCCGTTGCTGTTGATCGTGGGCT
TGCCGGTCAGCCTCAGCGGGCCACTGGTGAACTTGCTCGCGGTGCCCTGGATCAGCCTGCTGGTCTTGCCGCCAGCGCTG
CTCGGCACGGCGTTGTTACCGGTGCCGCTCATCGGTGAAGGCCTGCTGTGGATCGCCGGCGGGTTGCTCGATCTGTTGTT
CAAAGGGCTGGGGCTGATGGCCGGACGAATGCCTGCCTGGGTCCCTGTTGCGGTCCCGCCCTGGGCCCTGGGCATCGCCG
CGCTGGGGGCTTTCTTGCTGCTGTTGCCCAAAGGCGTGCCGCTGCGTGTGCTGGGGTGGCCGATGATGTTGCTGATGGTG
TTTCCACCGCGAGAACACCTGCCGCAAGGGCACGCCGAGGTCTGGCAACTGGACGTGGGCCAAGGCTTGGCGGTGCTGGT
ACGCACCCGGCATCACAGCCTGCTTTACGACGCCGGGCCGCGCTTTGGCGAGGCCGATGTGGGCGAGCGCGTCGTACTGC
CGACCTTGCGCAAACTGGGTGTGCGCGGCTTGGACCTGATGCTCCTCAGCCATGCCGACGCCGATCATGCCGGCGGTGCC
CTGGCCGTGCGCAAGGGACTGCCGACGATGGAAGTCATCAGCGGCGATCCCGACGCGCTGCCCGACGAATTGCAGGCCGG
GCCTTGCGACAGCGGCAGGCGCTGGGAATGGGATGGGGTCGGGTTCGAGTTGTGGCGCTGGGCCTCTGCCGTTGAAAGCA
ACCAGAAGTCCTGCGTCCTGCTGGTGGAGGCTGGCGGAGAACGCCTGCTGTTGACCGGCGACATCGACACCCCTGCCGAG
CGCGCCTTGCTTGACGAGGCCCTGGCGCTACCGATCCAGTGGCTGGCCGCACCTCATCACGGCAGCCGCAGTTCGTCATC
GATGGCATTGTTGTCGCGCCTCAAGCCGCATTCGGTGTTGATCTCCCGCGGGCAGGGCAATGCGTTCGGCCATCCCCATC
CCCAGGTGATGGCCCGCTACCGTCGCTTGGGCCTGGCGACCTACGACAGCGCCGAGCAGGGCGCCATTCGTCTGCAACTG
GGCGCGTTCGAATTACCACGCACCGAGGCCGGGCACCGACGCTACTGGCGCGATCCGCCCGCTGTCGGGACACCGAGGCA
ACATTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-166)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-676)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	60.894	95.722	0.583
comA	Ralstonia pseudosolanacearum GMI1000	32.231	100	0.365