Detailed information NTG0783135

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: MGCS36089_RS01980
• Genome accession: NZ_CP117284
• Coordinates: 367216..368142 (+)
• Length: 308 a.a.
• NCBI ID: WP_084916649.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 362216..373142

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS36089_RS01965 (MGCS36089_00792)	pbp3	362288..363304 (-)	1017	Protein_334	D-alanyl-D-alanine carboxypeptidase PBP3	-
MGCS36089_RS01970 (MGCS36089_00794)	amiA	363678..365648 (+)	1971	WP_042357846.1	peptide ABC transporter substrate-binding protein	Regulator
MGCS36089_RS01975 (MGCS36089_00796)	amiC	365714..367216 (+)	1503	WP_003057826.1	ABC transporter permease	Regulator
MGCS36089_RS01980 (MGCS36089_00798)	amiD	367216..368142 (+)	927	WP_084916649.1	oligopeptide ABC transporter permease OppC	Regulator
MGCS36089_RS01985 (MGCS36089_00800)	amiE	368151..369221 (+)	1071	WP_003057822.1	ABC transporter ATP-binding protein	Regulator
MGCS36089_RS01990 (MGCS36089_00802)	amiF	369214..370137 (+)	924	WP_003057816.1	ATP-binding cassette domain-containing protein	Regulator
MGCS36089_RS02005 (MGCS36089_00808)	comX/sigX/comX2/sigX2	370507..370989 (+)	483	WP_003057148.1	sigma-70 family RNA polymerase sigma factor	Regulator
MGCS36089_RS02010 (MGCS36089_00810)	-	371234..371761 (+)	528	WP_015057333.1	YqeG family HAD IIIA-type phosphatase	-
MGCS36089_RS02015 (MGCS36089_00812)	yqeH	371761..372879 (+)	1119	WP_002985994.1	ribosome biogenesis GTPase YqeH	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34872.93 Da
• Isoelectric Point: 9.2260

>NTDB_id=783135 MGCS36089_RS01980 WP_084916649.1 367216..368142(+) (amiD) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
METIDKSKFRFVERDSRASEVIDTPAYSYWKSVFRQFFSKKSTIFMLMILVTILLMSFIYPMFANYDFGDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINVTIGVILGAIWGVSKAFDKVMIEIYNVISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRFRDLEYNLASQTLGTPMYKIAIKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRLIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=783135 MGCS36089_RS01980 WP_084916649.1 367216..368142(+) (amiD) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
ATGGAAACGATTGATAAATCAAAATTTCGATTTGTTGAGCGCGATAGCAGAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTATTGGAAATCCGTATTCCGTCAATTTTTCTCTAAAAAGTCTACTATCTTCATGCTAATGATTTTAGTGACCATCT
TATTGATGAGTTTTATTTACCCAATGTTTGCGAATTATGATTTTGGTGATGTGAGTAATATCAACGATTTCTCGAAACGT
TATATTTGGCCCAACGCCGAATACTGGTTTGGAACAGATAAAAACGGACAATCTTTGTTTGATGGTGTTTGGTATGGAGC
GCGTAATTCTATCTTAATTTCTGTTATAGCAACATTGATTAATGTGACTATCGGAGTTATTTTAGGAGCTATTTGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAGATTTATAATGTCATCTCAAACATTCCTTCAATGTTAATTATTATTGTT
TTGACCTATTCATTAGGTGCTGGTTTTTGGAATTTGATTTTAGCTTTCTGTATCACTGGATGGATCGGTGTAGCTTACTC
TATCCGTGTGCAAATCTTACGTTTCCGTGATTTGGAGTACAACCTTGCTAGCCAAACCCTAGGAACACCAATGTACAAAA
TTGCCATTAAGAACCTCTTGCCTCAATTGGTTTCAGTTATCATGACCATGTTGTCACAAATGTTACCAGTGTACGTGTCT
TCTGAGGCTTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACGACTCCAAGCTTAGGGCGTTTGATTGCTAATTATTC
TAGCAACTTAACAACAAATGCTTACCTCTTCTGGATTCCCTTAGTAACGTTGATTTTAGTATCATTACCATTGTATATTG
TCGGACAAAACCTGGCAGATGCCAGCGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	72.727	100	0.727
amiD	Streptococcus thermophilus LMG 18311	72.727	100	0.727
amiD	Streptococcus thermophilus LMD-9	72.727	100	0.727