Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   PO908_RS04260 Genome accession   NZ_CP117042
Coordinates   788292..789095 (+) Length   267 a.a.
NCBI ID   WP_021001533.1    Uniprot ID   A0AAP6BQW0
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 783292..794095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS04240 (PO908_04220) - 784272..785585 (+) 1314 WP_057489614.1 glycosyltransferase family 4 protein -
  PO908_RS04245 (PO908_04225) - 785612..785953 (+) 342 WP_021001530.1 hypothetical protein -
  PO908_RS04250 (PO908_04230) micA 786243..786944 (+) 702 WP_021001531.1 response regulator YycF Regulator
  PO908_RS04255 (PO908_04235) micB 786937..788289 (+) 1353 WP_394468113.1 cell wall metabolism sensor histidine kinase VicK Regulator
  PO908_RS04260 (PO908_04240) vicX 788292..789095 (+) 804 WP_021001533.1 MBL fold metallo-hydrolase Regulator
  PO908_RS04265 (PO908_04245) - 789104..789464 (+) 361 Protein_800 YbaN family protein -
  PO908_RS04270 (PO908_04250) rnc 789846..790544 (+) 699 WP_021001534.1 ribonuclease III -
  PO908_RS04275 (PO908_04255) smc 790535..794068 (+) 3534 WP_021001535.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29854.82 Da        Isoelectric Point: 6.0342

>NTDB_id=782250 PO908_RS04260 WP_021001533.1 788292..789095(+) (vicX) [Streptococcus anginosus strain CGMH_KH1]
MSEKGFKYSILASGSTGNCFYLETPKKKLLIDAGLSGKKITSLLSEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMVNQL
AQADLAVEHDFHICDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=782250 PO908_RS04260 WP_021001533.1 788292..789095(+) (vicX) [Streptococcus anginosus strain CGMH_KH1]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTAGCGTCAGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAAGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACTAGCTTATTGAGTGAAATTGACCGTAAACCAGAGGATT
TGGATGCCATTTTGGTAACGCATGAGCATAAGGATCATATCCATGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATTTATGCCAATCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAGATTGATGTTAGTCAGAAGCACATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGTGTTAGTCATGATGCGGTTGCGCCGCAATTTT
ACCGACTAATGAAAGATGATAAAAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCGGGGATTATT
GAAAATGCGGACGGGTATTTGATTGAGTCCAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGCCTGAA
GCAGCGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGTCATCTTAGCAAAGAAAACAATACCAAAGAATTGGCTCATATCACAATGGTCAATCAATTG
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCAGATACGGCGACACCTTTAACAAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.648

100

0.816