Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   PO908_RS01720 Genome accession   NZ_CP117042
Coordinates   315935..316981 (+) Length   348 a.a.
NCBI ID   WP_021001285.1    Uniprot ID   A0A1S1FEE5
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 310935..321981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS01690 (PO908_01690) tsaE 312308..312748 (+) 441 WP_003033807.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PO908_RS01695 (PO908_01695) - 312741..313262 (+) 522 WP_021001282.1 GNAT family N-acetyltransferase -
  PO908_RS01700 (PO908_01700) brpA 313269..314384 (+) 1116 WP_003025979.1 biofilm formation/cell division transcriptional regulator BrpA -
  PO908_RS01705 (PO908_01705) - 314431..314718 (-) 288 WP_021001284.1 hypothetical protein -
  PO908_RS01710 (PO908_01710) - 314728..315138 (-) 411 WP_003025977.1 HIT family protein -
  PO908_RS01715 (PO908_01715) pptA 315207..315938 (+) 732 WP_003025975.1 ABC transporter ATP-binding protein Regulator
  PO908_RS01720 (PO908_01720) pptB 315935..316981 (+) 1047 WP_021001285.1 ABC transporter permease Regulator
  PO908_RS01725 (PO908_01725) ccrZ 317032..317829 (+) 798 WP_003025972.1 cell cycle regulator CcrZ -
  PO908_RS01730 (PO908_01730) trmB 317826..318461 (+) 636 WP_021001286.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PO908_RS01735 (PO908_01735) - 319078..319767 (+) 690 WP_394468122.1 VIT family protein -
  PO908_RS01740 (PO908_01740) rimP 320018..320506 (+) 489 WP_204972055.1 ribosome maturation factor RimP -
  PO908_RS01745 (PO908_01745) nusA 320555..321748 (+) 1194 WP_003025963.1 transcription termination factor NusA -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 41045.42 Da        Isoelectric Point: 10.4750

>NTDB_id=782227 PO908_RS01720 WP_021001285.1 315935..316981(+) (pptB) [Streptococcus anginosus strain CGMH_KH1]
MRNLFQKRRQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPKNHLPIILALVVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWALLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETIMALLFFQD
RVALLFMIGITLLLYFIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=782227 PO908_RS01720 WP_021001285.1 315935..316981(+) (pptB) [Streptococcus anginosus strain CGMH_KH1]
ATGAGAAATCTGTTTCAAAAGCGCAGGCAAGTATTTCGCAATCAATGTTTGAAGTATTCACGCTATGTTTTTAATGACCA
TTTTGTCCTCTTTTTATTGGTCTTTATTGGCTTTTTAGCTGTTCAATACAGTCAACTGTTACGAAATTTTCCTAAAAATC
ACCTGCCAATCATTCTTGCTTTAGTGGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATCGCGACTTATATGGAAAAA
CCAGATAGTTTATTTTTGTTAGTCAAAGAGGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGCCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGCTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACCAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCAAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGAAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTGGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATAATGGCTTTGTTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATTGGAATTACATTGCTACTTTATTTCATCTATTTACCATTTAAATTAAGAAGTTTGGT
TGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1S1FEE5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.563

100

0.486

  pptB Streptococcus salivarius strain HSISS4

47.414

100

0.474