Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PO908_RS01715 Genome accession   NZ_CP117042
Coordinates   315207..315938 (+) Length   243 a.a.
NCBI ID   WP_003025975.1    Uniprot ID   -
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 310207..320938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS01685 (PO908_01685) - 310624..312063 (+) 1440 WP_021001281.1 NCS2 family permease -
  PO908_RS01690 (PO908_01690) tsaE 312308..312748 (+) 441 WP_003033807.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PO908_RS01695 (PO908_01695) - 312741..313262 (+) 522 WP_021001282.1 GNAT family N-acetyltransferase -
  PO908_RS01700 (PO908_01700) brpA 313269..314384 (+) 1116 WP_003025979.1 biofilm formation/cell division transcriptional regulator BrpA -
  PO908_RS01705 (PO908_01705) - 314431..314718 (-) 288 WP_021001284.1 hypothetical protein -
  PO908_RS01710 (PO908_01710) - 314728..315138 (-) 411 WP_003025977.1 HIT family protein -
  PO908_RS01715 (PO908_01715) pptA 315207..315938 (+) 732 WP_003025975.1 ABC transporter ATP-binding protein Regulator
  PO908_RS01720 (PO908_01720) pptB 315935..316981 (+) 1047 WP_021001285.1 ABC transporter permease Regulator
  PO908_RS01725 (PO908_01725) ccrZ 317032..317829 (+) 798 WP_003025972.1 cell cycle regulator CcrZ -
  PO908_RS01730 (PO908_01730) trmB 317826..318461 (+) 636 WP_021001286.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PO908_RS01735 (PO908_01735) - 319078..319767 (+) 690 WP_394468122.1 VIT family protein -
  PO908_RS01740 (PO908_01740) rimP 320018..320506 (+) 489 WP_204972055.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26832.36 Da        Isoelectric Point: 4.6585

>NTDB_id=782226 PO908_RS01715 WP_003025975.1 315207..315938(+) (pptA) [Streptococcus anginosus strain CGMH_KH1]
MLEIKGLTGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTAYREKIGFIP
ETPSLYEELTLREHIETVAMAYNVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKAKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=782226 PO908_RS01715 WP_003025975.1 315207..315938(+) (pptA) [Streptococcus anginosus strain CGMH_KH1]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGCTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAGGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACGGCTTATCGTGAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTACGAAGAATTGACTTTAAGAGAACATATTGAAACGGTTGCTATGGCCTATAATGTGGAGCAAAA
GGTGGCTTTTGCACGCGTGGAAAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAGGGGATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTAGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGCAAAAGGCAAGTCAATTCTTAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGCTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

72.803

98.354

0.716
  pptA Streptococcus salivarius strain HSISS4

72.385

98.354

0.712