Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   M0P28_RS08670 Genome accession   NZ_CP116958
Coordinates   1706009..1707010 (-) Length   333 a.a.
NCBI ID   WP_117479424.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP074     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1701009..1712010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P28_RS08655 (M0P28_08655) thrS 1701284..1703230 (-) 1947 WP_041974366.1 threonine--tRNA ligase -
  M0P28_RS08660 (M0P28_08660) - 1703581..1704915 (-) 1335 WP_058692406.1 glycosyltransferase family 4 protein -
  M0P28_RS08665 (M0P28_08665) - 1704917..1705915 (-) 999 WP_003065799.1 glycosyltransferase family 4 protein -
  M0P28_RS08670 (M0P28_08670) ccpA 1706009..1707010 (-) 1002 WP_117479424.1 catabolite control protein A Regulator
  M0P28_RS08675 (M0P28_08675) - 1707338..1708423 (+) 1086 WP_003065805.1 M24 family metallopeptidase -
  M0P28_RS08680 (M0P28_08680) - 1708539..1708802 (+) 264 WP_230321726.1 hypothetical protein -
  M0P28_RS08685 (M0P28_08685) - 1708950..1709123 (-) 174 WP_230321727.1 hypothetical protein -
  M0P28_RS08690 (M0P28_08690) - 1709305..1710054 (-) 750 WP_013852120.1 ChbG/HpnK family deacetylase -
  M0P28_RS08695 (M0P28_08695) - 1710064..1711467 (-) 1404 WP_003065816.1 PTS transporter subunit EIIC -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36540.59 Da        Isoelectric Point: 5.0353

>NTDB_id=781704 M0P28_RS08670 WP_117479424.1 1706009..1707010(-) (ccpA) [Streptococcus pasteurianus strain WUSP074]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVVDVVDILAKSNKEIAFVSGPLIDDINGKVRLAGYKEGLEKNGLSFKEGLVFEANYNYKEGFELAQRVINSG
ATAAFVAEDELAAGLLNGLFESGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGLITRGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=781704 M0P28_RS08670 WP_117479424.1 1706009..1707010(-) (ccpA) [Streptococcus pasteurianus strain WUSP074]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCCCGAGAAGCAGGCGTCTCTATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAACGTAAAGGAAAACACACGTAAAAAAGTTCTTGAAGTTATTGATCGTTTGGATTATCGTCCAAATG
CCGTTGCCCGCGGTTTAGCAAGTAAAAAGACAACAACAGTAGGTGTTGTTATTCCCAATATTGCCAATAGCTATTTCTCA
ATTCTTGCTAAAGGAATTGATGATATTGCCGCTATGTACAAGTATAATATCGTACTTGCTTCAAGTGATGAAGATGATGA
TAAGGAGGTTAACGTTGTTAACACCTTGTTTGCTAAACAAGTTGACGGTATTATCTTCATGGGACATCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTACTTGCGGGTACAGTTGACTTAGAACACCAACTCCCAAGT
GTTAATATTGATTACAAAGCAGCGGTTGTTGATGTTGTTGATATTTTAGCTAAAAGCAATAAAGAAATTGCCTTTGTTTC
TGGTCCACTTATCGATGATATCAACGGTAAAGTGCGTTTAGCTGGTTACAAAGAAGGTCTTGAAAAAAATGGCTTATCAT
TCAAAGAAGGTCTTGTCTTTGAAGCTAATTACAACTATAAAGAAGGATTTGAACTTGCACAACGTGTGATTAATTCTGGC
GCAACAGCAGCCTTTGTTGCCGAAGACGAATTGGCAGCAGGCTTACTGAACGGCTTGTTCGAATCTGGCAAAAAAGTTCC
AGAAGACTTTGAAATCATCACAAGCAATGATTCACCAATTACATCATACACACGCCCAAACCTTAGCTCAATCAGTCAAC
CAGTTTATGACCTTGGTGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAGGAACTTGAAGAAAAAGAAATT
CTTCTTAACCATGGTCTTATAACACGTGGCACAACACGTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

80.18

100

0.802
  ccpA Streptococcus pneumoniae D39

77.778

100

0.778
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556