Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   M0P28_RS05970 Genome accession   NZ_CP116958
Coordinates   1160317..1161657 (-) Length   446 a.a.
NCBI ID   WP_003064880.1    Uniprot ID   A0AAW6YHF0
Organism   Streptococcus pasteurianus strain WUSP074     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1155317..1166657
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P28_RS05945 (M0P28_05945) - 1155869..1156933 (-) 1065 WP_003064867.1 BMP family lipoprotein -
  M0P28_RS05950 (M0P28_05950) deoC 1157128..1157790 (-) 663 WP_013851852.1 deoxyribose-phosphate aldolase -
  M0P28_RS05955 (M0P28_05955) - 1158246..1158839 (-) 594 WP_003064873.1 class I SAM-dependent methyltransferase -
  M0P28_RS05960 (M0P28_05960) coaA 1158955..1159875 (+) 921 WP_003064875.1 type I pantothenate kinase -
  M0P28_RS05965 (M0P28_05965) rpsT 1159950..1160201 (+) 252 WP_003064878.1 30S ribosomal protein S20 -
  M0P28_RS05970 (M0P28_05970) ciaH 1160317..1161657 (-) 1341 WP_003064880.1 sensor histidine kinase Regulator
  M0P28_RS05975 (M0P28_05975) ciaR 1161647..1162321 (-) 675 WP_013851854.1 response regulator transcription factor Regulator
  M0P28_RS05980 (M0P28_05980) - 1162514..1165057 (-) 2544 WP_003064884.1 M1 family metallopeptidase -
  M0P28_RS05985 (M0P28_05985) phoU 1165280..1165933 (-) 654 WP_003064885.1 phosphate signaling complex protein PhoU -

Sequence

Protein


Download         Length: 446 a.a.        Molecular weight: 49991.74 Da        Isoelectric Point: 5.2300

>NTDB_id=781694 M0P28_RS05970 WP_003064880.1 1160317..1161657(-) (ciaH) [Streptococcus pasteurianus strain WUSP074]
MLNKLQKKLSSGTFSHFFHFFAVFTGIFVIMTVIILQIMRYGLYSSVDTSLQNAADNADDYVARTMERSDTLQSDDSSTD
AFSGGTGSSGKAKPSTGGVGLSNVSVLLYDEDGKILNALDAFVQFGTLSTTFDEDSVGEIKEQKITTIFGQTEKYHVLAV
KVSSSEYPSIKYATFLVSVRQLDEANERYVTITITVMVIFWIISVVASVYLANWTRKPIMESYEKQKSFVENASHELRTP
LAVLQNRLESLFRRPDATILDNSESIAASLDEVRNMRILTTNLLNLARRDDGLKVELEDIQPATFNEIFENYDMIAEENG
KTFIGHNLAERPIKSDRTLLKQLMTILFDNAIKYTDDDGVIEFTVKTTDKQTILTVADNGPGISDADKVKIFDRFYRVDK
ARTRQKGGFGLGLSLAKQIVDVLKGDIQVKDNQPKGTIFEVRFNRH

Nucleotide


Download         Length: 1341 bp        

>NTDB_id=781694 M0P28_RS05970 WP_003064880.1 1160317..1161657(-) (ciaH) [Streptococcus pasteurianus strain WUSP074]
ATGCTGAATAAATTACAGAAAAAATTATCATCAGGGACATTTTCACATTTCTTTCATTTCTTTGCTGTCTTTACAGGGAT
TTTTGTCATCATGACAGTGATTATTTTGCAGATTATGCGTTATGGACTTTATTCCTCTGTTGATACGAGTTTGCAAAATG
CAGCAGACAATGCTGATGATTATGTCGCGCGAACTATGGAACGTAGTGATACTTTGCAATCGGACGATTCTTCTACGGAC
GCTTTTTCAGGAGGAACAGGTAGTTCTGGGAAAGCGAAACCTAGTACCGGCGGAGTTGGTCTAAGCAACGTTAGCGTTCT
TCTTTATGATGAAGACGGTAAAATTTTAAATGCTTTGGATGCTTTTGTTCAATTTGGAACCTTATCGACAACTTTTGATG
AAGATAGTGTCGGTGAAATCAAAGAACAGAAGATTACGACCATTTTTGGTCAAACCGAGAAATATCATGTGTTGGCTGTA
AAAGTGAGTAGTAGCGAGTATCCTAGTATAAAATACGCTACTTTCCTTGTTAGTGTTCGTCAGTTAGATGAAGCTAACGA
ACGATACGTGACAATTACGATTACTGTTATGGTTATTTTCTGGATTATTTCGGTCGTAGCAAGTGTTTATCTTGCCAATT
GGACAAGAAAACCAATTATGGAAAGCTATGAAAAACAAAAATCCTTTGTCGAAAATGCTAGTCATGAGTTGCGTACACCG
CTTGCTGTTTTGCAGAATCGTTTAGAAAGTCTCTTTAGGCGACCTGATGCTACAATTTTGGACAATAGTGAAAGTATTGC
TGCCAGTCTAGACGAAGTTCGAAATATGCGAATTCTGACCACAAATCTGTTAAATTTAGCACGTCGTGACGATGGTTTGA
AAGTTGAGTTAGAGGATATTCAACCAGCAACTTTCAATGAAATCTTTGAAAATTACGATATGATTGCTGAAGAAAATGGC
AAGACGTTTATCGGACATAATTTGGCAGAGCGACCAATCAAATCAGACCGTACATTGTTAAAACAACTGATGACTATCTT
ATTTGATAATGCCATAAAATACACCGACGATGATGGTGTCATTGAATTTACTGTTAAAACAACAGATAAACAAACAATTC
TGACAGTTGCTGATAACGGCCCAGGGATTAGCGACGCTGATAAAGTTAAGATTTTTGACCGTTTTTATCGTGTGGATAAA
GCACGGACACGTCAAAAAGGCGGTTTTGGTCTAGGATTGTCACTTGCTAAGCAAATTGTTGATGTTTTAAAAGGCGATAT
TCAAGTCAAAGATAACCAACCAAAAGGAACTATTTTTGAAGTTCGTTTTAATCGTCATTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(227-292)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(336-443)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

59.142

99.327

0.587
  ciaH Streptococcus pneumoniae Rx1

51.467

99.327

0.511
  ciaH Streptococcus pneumoniae D39

51.467

99.327

0.511
  ciaH Streptococcus pneumoniae R6

51.467

99.327

0.511
  ciaH Streptococcus pneumoniae TIGR4

51.467

99.327

0.511