Detailed information NTG0780747

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PPM45_RS17525
• Genome accession: NZ_CP116870
• Coordinates: 3411167..3412324 (-)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus subtilis subsp. subtilis strain Master_strain
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3406167..3417324

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PPM45_RS17495	yvyF	3406420..3406839 (-)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-
PPM45_RS17500	comFC	3406913..3407635 (-)	723	WP_003227991.1	comF operon protein ComFC	Machinery gene
PPM45_RS17505	comFB	3407599..3407895 (-)	297	WP_003227989.1	late competence protein ComFB	-
PPM45_RS17510	comFA	3407955..3409346 (-)	1392	WP_003243962.1	ATP-dependent helicase ComFA	Machinery gene
PPM45_RS17515	fakBA	3409452..3410297 (-)	846	WP_003244125.1	DegV family protein	-
PPM45_RS17520	degU	3410395..3411084 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
PPM45_RS17525	degS	3411167..3412324 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
PPM45_RS17530	yvyE	3412541..3413194 (+)	654	WP_003227979.1	YigZ family protein	-
PPM45_RS17535	tagV	3413194..3414369 (+)	1176	WP_003244117.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
PPM45_RS17540	tagO	3414442..3415518 (-)	1077	WP_003227975.1	MraY family glycosyltransferase	-
PPM45_RS17545	tuaH	3415663..3416856 (-)	1194	WP_003243252.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=780747 PPM45_RS17525 WP_003227983.1 3411167..3412324(-) (degS) [Bacillus subtilis subsp. subtilis strain Master_strain]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=780747 PPM45_RS17525 WP_003227983.1 3411167..3412324(-) (degS) [Bacillus subtilis subsp. subtilis strain Master_strain]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1