Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PPM66_RS01545 Genome accession   NZ_CP116867
Coordinates   301697..302647 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis subsp. subtilis strain MGP008     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 296697..307647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM66_RS01520 rapC 298156..299304 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  PPM66_RS01525 phrC 299288..299410 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  PPM66_RS01530 yczM 299510..299599 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  PPM66_RS01535 yczN 299681..299794 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  PPM66_RS01540 thrD 299948..301312 (-) 1365 WP_009966541.1 aspartate kinase -
  PPM66_RS01545 ceuB 301697..302647 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  PPM66_RS01550 yclO 302640..303587 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  PPM66_RS01555 yclP 303581..304339 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  PPM66_RS01560 yclQ 304361..305314 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  PPM66_RS01565 cdaE 305361..306779 (-) 1419 WP_003246604.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=780428 PPM66_RS01545 WP_003234491.1 301697..302647(+) (ceuB) [Bacillus subtilis subsp. subtilis strain MGP008]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=780428 PPM66_RS01545 WP_003234491.1 301697..302647(+) (ceuB) [Bacillus subtilis subsp. subtilis strain MGP008]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522