Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PNF30_RS13695 Genome accession   NZ_CP116774
Coordinates   2653071..2653268 (-) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus safensis strain SRCM125915     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2648071..2658268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PNF30_RS13670 (PNF30_13670) - 2648443..2649423 (-) 981 WP_095408192.1 ABC transporter ATP-binding protein -
  PNF30_RS13675 (PNF30_13675) - 2649573..2650376 (-) 804 WP_095408191.1 DUF2268 domain-containing protein -
  PNF30_RS13680 (PNF30_13680) fabF 2650454..2651695 (-) 1242 WP_041089814.1 beta-ketoacyl-ACP synthase II -
  PNF30_RS13685 (PNF30_13685) - 2651717..2652655 (-) 939 WP_095408190.1 beta-ketoacyl-ACP synthase III -
  PNF30_RS13690 (PNF30_13690) - 2652827..2653060 (+) 234 WP_144470147.1 hypothetical protein -
  PNF30_RS13695 (PNF30_13695) comZ 2653071..2653268 (-) 198 WP_024425054.1 ComZ family protein Regulator
  PNF30_RS13700 (PNF30_13700) med 2653281..2654243 (-) 963 WP_144470145.1 BMP family ABC transporter substrate-binding protein Regulator
  PNF30_RS13705 (PNF30_13705) - 2654335..2654910 (-) 576 WP_095408187.1 nad binding enzyme -
  PNF30_RS13710 (PNF30_13710) - 2654984..2655724 (-) 741 WP_205185342.1 hypothetical protein -
  PNF30_RS13715 (PNF30_13715) - 2655937..2656131 (+) 195 WP_003211779.1 YjzD family protein -
  PNF30_RS13720 (PNF30_13720) - 2656246..2657511 (-) 1266 WP_095408675.1 MFS transporter -
  PNF30_RS13725 (PNF30_13725) - 2657685..2657864 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=780195 PNF30_RS13695 WP_024425054.1 2653071..2653268(-) (comZ) [Bacillus safensis strain SRCM125915]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=780195 PNF30_RS13695 WP_024425054.1 2653071..2653268(-) (comZ) [Bacillus safensis strain SRCM125915]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAGGAAGCATACGAGCTTG
GAAAAGCGGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677