Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   QYT30_RS01555 Genome accession   NZ_CP129557
Coordinates   287760..288803 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   Q99SZ7
Organism   Staphylococcus aureus strain 46D     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 282760..293803
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYT30_RS01525 (QYT30_01530) - 283485..283595 (+) 111 WP_014937049.1 hypothetical protein -
  QYT30_RS01530 (QYT30_01535) - 283624..284037 (+) 414 WP_025174370.1 hypothetical protein -
  QYT30_RS01535 (QYT30_01540) - 284226..285212 (-) 987 WP_000999712.1 FUSC family protein -
  QYT30_RS01540 (QYT30_01545) map 285686..286444 (+) 759 WP_000636145.1 type I methionyl aminopeptidase -
  QYT30_RS01545 (QYT30_01550) - 286661..287047 (+) 387 WP_001110182.1 hypothetical protein -
  QYT30_RS01550 (QYT30_01555) liaF 287062..287763 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  QYT30_RS01555 (QYT30_01560) vraS 287760..288803 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  QYT30_RS01560 (QYT30_01565) vraR 288793..289422 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  QYT30_RS01565 (QYT30_01570) - 289535..290752 (-) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  QYT30_RS01570 (QYT30_01575) - 291030..291305 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  QYT30_RS01575 (QYT30_01580) - 291312..291776 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  QYT30_RS01580 (QYT30_01585) - 291923..292123 (+) 201 WP_000180460.1 DUF1128 family protein -
  QYT30_RS01585 (QYT30_01590) - 292126..293382 (+) 1257 WP_001793428.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=780194 QYT30_RS01555 WP_001017131.1 287760..288803(+) (vraS) [Staphylococcus aureus strain 46D]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=780194 QYT30_RS01555 WP_001017131.1 287760..288803(+) (vraS) [Staphylococcus aureus strain 46D]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTTCTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAATTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAATTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99SZ7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1