Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PNF29_RS19260 Genome accession   NZ_CP116773
Coordinates   3629149..3630099 (-) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain SRCM125727     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3624149..3635099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PNF29_RS19240 (PNF29_19240) cdaE 3625018..3626436 (+) 1419 WP_041340166.1 MDR family MFS transporter -
  PNF29_RS19245 (PNF29_19245) yclQ 3626482..3627435 (-) 954 WP_017696154.1 petrobactin ABC transporter substrate-binding protein YclQ -
  PNF29_RS19250 (PNF29_19250) yclP 3627457..3628215 (-) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  PNF29_RS19255 (PNF29_19255) yclO 3628209..3629156 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  PNF29_RS19260 (PNF29_19260) ceuB 3629149..3630099 (-) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  PNF29_RS19265 (PNF29_19265) thrD 3630484..3631848 (+) 1365 WP_041340152.1 aspartate kinase -
  PNF29_RS19270 (PNF29_19270) yczN 3632001..3632114 (+) 114 WP_272515747.1 YjcZ family sporulation protein -
  PNF29_RS19275 (PNF29_19275) yczM 3632196..3632285 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  PNF29_RS19280 (PNF29_19280) phrC 3632385..3632507 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  PNF29_RS19285 (PNF29_19285) rapC 3632491..3633639 (-) 1149 WP_015252823.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=780140 PNF29_RS19260 WP_014475804.1 3629149..3630099(-) (ceuB) [Bacillus subtilis strain SRCM125727]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=780140 PNF29_RS19260 WP_014475804.1 3629149..3630099(-) (ceuB) [Bacillus subtilis strain SRCM125727]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCCTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525