Detailed information NTG0780082

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PNF29_RS03000
• Genome accession: NZ_CP116773
• Coordinates: 575064..576221 (+)
• Length: 385 a.a.
• NCBI ID: WP_272515926.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM125727
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 570064..581221

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PNF29_RS02980 (PNF29_02980)	tuaH	570529..571722 (+)	1194	WP_072557276.1	teichuronic acid biosynthesis protein TuaH	-
PNF29_RS02985 (PNF29_02985)	tagO	571867..572943 (+)	1077	WP_003227975.1	MraY family glycosyltransferase	-
PNF29_RS02990 (PNF29_02990)	tagV	573016..574194 (-)	1179	WP_272515925.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
PNF29_RS02995 (PNF29_02995)	yvyE	574194..574847 (-)	654	WP_003227979.1	YigZ family protein	-
PNF29_RS03000 (PNF29_03000)	degS	575064..576221 (+)	1158	WP_272515926.1	two-component sensor histidine kinase DegS	Regulator
PNF29_RS03005 (PNF29_03005)	degU	576304..576993 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
PNF29_RS03010 (PNF29_03010)	fakBA	577091..577936 (+)	846	WP_272515927.1	DegV family protein	-
PNF29_RS03015 (PNF29_03015)	comFA	578042..579433 (+)	1392	WP_003243962.1	ATP-dependent helicase ComFA	Machinery gene
PNF29_RS03020 (PNF29_03020)	comFB	579493..579789 (+)	297	WP_003227989.1	late competence protein ComFB	-
PNF29_RS03025 (PNF29_03025)	comFC	579753..580475 (+)	723	WP_129137967.1	comF operon protein ComFC	Machinery gene
PNF29_RS03030 (PNF29_03030)	yvyF	580549..580968 (+)	420	WP_041351272.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44956.82 Da
• Isoelectric Point: 6.7800

>NTDB_id=780082 PNF29_RS03000 WP_272515926.1 575064..576221(+) (degS) [Bacillus subtilis strain SRCM125727]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQKIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=780082 PNF29_RS03000 WP_272515926.1 575064..576221(+) (degS) [Bacillus subtilis strain SRCM125727]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGAAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.74	100	0.997