Detailed information NTG0779924

Bioinformatically predicted

Overview

• Name: hexA
• Type: Machinery gene
• Locus tag: QY866_RS09855
• Genome accession: NZ_CP129530
• Coordinates: 1933890..1936493 (-)
• Length: 867 a.a.
• NCBI ID: WP_056947789.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain A1262
• Function: DNA mismatch repair (predicted from homology) Homologous recombination

Genomic Context

Location: 1928890..1941493

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QY866_RS09835 (QY866_09825)	ruvA	1929762..1930373 (-)	612	WP_011374075.1	Holliday junction branch migration protein RuvA	Machinery gene
QY866_RS09840 (QY866_09830)	-	1930784..1931347 (-)	564	Protein_1878	TIGR00730 family Rossman fold protein	-
QY866_RS09845 (QY866_09835)	-	1931360..1931905 (-)	546	WP_056947792.1	Maf family protein	-
QY866_RS09850 (QY866_09840)	hexB	1931905..1933866 (-)	1962	WP_056947790.1	DNA mismatch repair endonuclease MutL	Machinery gene
QY866_RS09855 (QY866_09845)	hexA	1933890..1936493 (-)	2604	WP_056947789.1	DNA mismatch repair protein MutS	Machinery gene
QY866_RS09860 (QY866_09850)	-	1936515..1937321 (-)	807	WP_011374070.1	TIGR00282 family metallophosphoesterase	-
QY866_RS09865 (QY866_09855)	-	1937498..1939327 (-)	1830	WP_341843952.1	APC family permease	-
QY866_RS09870 (QY866_09860)	-	1939636..1939788 (+)	153	WP_155516314.1	hypothetical protein	-
QY866_RS09875 (QY866_09865)	groL	1939826..1941451 (-)	1626	WP_035146245.1	chaperonin GroEL	-

Sequence

Protein

• Length: 867 a.a.
• Molecular weight: 96806.68 Da
• Isoelectric Point: 5.3178

>NTDB_id=779924 QY866_RS09855 WP_056947789.1 1933890..1936493(-) (hexA) [Latilactobacillus sakei strain A1262]
MPQKTKETPMMAQYQKVKDQYPDAFLFYRLGDFYELFNDDAVKASQLLELTLTARNKNAADPIPMCGVPHHAAQNYIDIL
VDQGYKVAICEQMEDPKTAKGMVKREVVQLVTPGTVMDEKAGHAKQNNYLTAVVAQGDQFGFAYTDLSTGEMKVSQISSL
DVLLNEMLSLQTKEVVVNHDVPSEVVQAFVQQQILVSYQDEGADTAEVSFVSQNISQPLALAVIKQLVVYLATTQKRHLG
HLQRAQAYEPSQYLKLDHSAKMNLELTASLRTGHKSGTLLWLLDETKTAMGGRLLKQWLERPLLDLNQIKNRQNQVASFL
QHYFERTNLQEALTKVYDLERLAGRVAFGSVNGRDLIQLKTSLEQIPKIKDVLTGINETQAFDQALTRLDPVDDVRTLIE
TAINPDSPISVTDGGIIQDGYDEQLDQYRNAMSNGKQWLAQLEAQEREATGIHNLKIGFNRVFGYYIEVTRANLSSLPEG
RYERKQTLTNAERFITPELKEKEQLILEAEERSTALEYELFTQVREQVKLQIERLQTLAKGVAALDVLQSFAVVSESYHY
VQPTLRTDSREIDLVDGRHPVVEKVLGRQKYIPNAVQMGKETDMLLITGPNMSGKSTYMRQLALTVIMAQMGCFVPAKSA
NLPVFDQIFTRIGAADDLISGQSTFMVEMMEANRAIMSATANSLILFDEIGRGTATYDGMALAQAIIEYIHDHVHAKTLF
STHYHELTALADMLTALRNVHVGAVEENGELVFLHKMLAGPADKSYGIHVAKLAGMPETLLQRADVILGQLEDKPKAPVQ
PATVVPAQPAAAAVEEQMALFEPEVAAPVDKKTDKVVAAIKNFDLMSATPLEALNQLYEWQKQLNKH

Nucleotide

• Length: 2604 bp

>NTDB_id=779924 QY866_RS09855 WP_056947789.1 1933890..1936493(-) (hexA) [Latilactobacillus sakei strain A1262]
ATGCCGCAAAAAACAAAAGAAACGCCAATGATGGCCCAATATCAAAAGGTTAAGGATCAATATCCAGACGCCTTTTTATT
TTATAGATTGGGTGATTTTTACGAATTATTCAATGACGATGCTGTTAAAGCATCACAACTTTTAGAATTAACGCTGACAG
CGCGTAATAAGAATGCAGCAGACCCCATTCCGATGTGTGGTGTGCCCCATCATGCAGCGCAAAACTACATTGATATTTTA
GTGGATCAAGGTTACAAGGTCGCCATTTGTGAACAGATGGAAGATCCTAAAACGGCTAAGGGCATGGTCAAACGCGAAGT
CGTTCAATTAGTAACACCTGGGACTGTGATGGACGAAAAAGCCGGTCACGCTAAACAAAATAATTATTTAACGGCAGTCG
TTGCACAGGGCGATCAATTTGGCTTCGCCTATACAGATTTATCCACAGGTGAAATGAAGGTTAGCCAAATCAGTAGTTTA
GATGTGTTATTAAACGAAATGTTGAGTTTACAAACCAAAGAAGTGGTTGTGAATCATGATGTCCCAAGCGAAGTCGTTCA
AGCCTTTGTCCAACAACAAATCTTGGTTTCTTATCAAGATGAGGGGGCCGATACGGCAGAGGTCAGTTTTGTTTCTCAAA
ACATCTCACAACCACTAGCGTTAGCCGTCATTAAACAATTAGTTGTTTATTTAGCAACGACGCAAAAGCGGCACTTGGGT
CATTTACAACGCGCCCAAGCCTATGAACCTTCTCAATACTTGAAGTTGGATCATTCGGCTAAGATGAACCTCGAATTGAC
GGCTTCATTACGAACTGGTCATAAGAGCGGGACGTTATTGTGGCTACTGGATGAAACAAAGACTGCGATGGGTGGTCGCT
TATTAAAACAATGGTTGGAACGACCATTGTTGGATTTAAACCAGATTAAGAACCGGCAAAACCAAGTCGCTAGTTTCTTA
CAGCATTACTTTGAACGGACGAACCTTCAAGAAGCCCTAACTAAAGTTTATGATTTGGAACGTCTAGCAGGCCGCGTTGC
TTTTGGGAGCGTTAATGGGCGCGATTTGATTCAATTAAAAACATCCTTAGAACAGATTCCAAAGATTAAAGATGTTTTGA
CGGGCATTAACGAAACGCAGGCTTTTGATCAAGCGTTAACGCGTTTGGATCCAGTTGATGATGTGCGGACGTTAATTGAA
ACAGCGATTAACCCGGATTCACCGATTTCAGTGACTGATGGTGGGATTATTCAAGATGGTTACGACGAACAACTTGATCA
ATACCGCAATGCGATGTCTAACGGCAAGCAGTGGTTGGCGCAATTAGAGGCGCAAGAACGAGAAGCTACGGGCATTCATA
ATTTGAAAATCGGCTTTAACCGCGTCTTTGGGTATTATATCGAAGTCACGCGGGCTAACTTGAGTTCATTACCGGAAGGG
CGGTATGAACGCAAACAAACGTTAACCAACGCCGAACGATTCATCACACCGGAATTAAAAGAAAAAGAACAACTGATTTT
AGAGGCGGAAGAACGCTCAACCGCTCTAGAATACGAATTGTTTACCCAAGTTCGGGAACAAGTGAAGTTACAAATTGAAC
GGCTCCAAACATTGGCTAAAGGCGTAGCGGCCCTAGATGTCTTGCAAAGTTTTGCGGTCGTCAGCGAAAGCTACCACTAT
GTCCAACCAACATTAAGAACTGATAGTCGCGAAATTGATTTAGTCGATGGCCGTCATCCGGTGGTTGAAAAGGTATTGGG
ACGCCAAAAATATATCCCCAATGCTGTTCAAATGGGCAAAGAAACGGATATGTTATTAATTACCGGACCTAATATGTCTG
GTAAAAGTACCTACATGCGGCAATTGGCCTTAACGGTCATCATGGCGCAAATGGGTTGTTTTGTACCTGCCAAGTCAGCG
AACTTGCCTGTATTTGACCAAATCTTTACCCGCATTGGTGCGGCAGATGATTTGATTTCAGGACAAAGTACGTTTATGGT
AGAAATGATGGAAGCCAACCGTGCGATTATGAGTGCGACCGCCAATAGTTTAATTCTCTTCGATGAAATTGGTCGGGGAA
CGGCCACTTATGATGGGATGGCCTTGGCGCAAGCGATTATCGAATATATCCATGATCACGTCCACGCCAAGACGCTCTTT
TCAACGCATTATCATGAACTGACGGCTTTAGCCGATATGTTGACCGCCCTTCGTAACGTGCATGTTGGTGCAGTTGAGGA
AAACGGCGAGTTGGTCTTCTTACACAAGATGTTGGCCGGACCTGCGGATAAGTCTTACGGGATTCATGTCGCTAAACTAG
CGGGCATGCCAGAAACCTTATTACAACGGGCCGATGTTATTTTAGGTCAATTAGAAGATAAACCAAAAGCACCGGTGCAA
CCAGCAACAGTCGTACCAGCACAACCGGCTGCAGCGGCTGTCGAAGAACAGATGGCGCTTTTTGAACCAGAAGTGGCGGC
CCCGGTCGATAAGAAAACAGATAAAGTGGTAGCGGCAATTAAGAATTTTGATTTGATGAGCGCCACACCACTAGAAGCCC
TCAATCAATTATATGAGTGGCAAAAGCAATTAAATAAACATTAA

Domains

Predicted by InterProScan.

• MutS domain III (MutS_III) (263-552)

• MutS domain II (MutS_II) (128-243)

• MutS domain I (MutS_I) (8-119)

• MutS domain V (MutS_V) (605-792)

• MutS family domain IV (MutS_IV) (420-512)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
hexA	Streptococcus pneumoniae R6	52.139	99.769	0.52
mutS	Pseudomonas stutzeri strain ATCC 17587	38.655	100	0.391