Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   QYH60_RS00525 Genome accession   NZ_CP129292
Coordinates   94328..95110 (-) Length   260 a.a.
NCBI ID   WP_301401203.1    Uniprot ID   -
Organism   Lactococcus lactis subsp. lactis strain KMGR2-43     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 89328..100110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYH60_RS00485 (QYH60_00485) - 89421..89735 (+) 315 WP_301401198.1 hypothetical protein -
  QYH60_RS00490 (QYH60_00490) - 89722..90321 (+) 600 WP_301401199.1 hypothetical protein -
  QYH60_RS00495 (QYH60_00495) - 90529..90840 (+) 312 WP_301401200.1 hypothetical protein -
  QYH60_RS00500 (QYH60_00500) - 90840..91172 (+) 333 WP_081199223.1 hypothetical protein -
  QYH60_RS00505 (QYH60_00505) - 91851..92588 (+) 738 WP_301401201.1 hypothetical protein -
  QYH60_RS00510 (QYH60_00510) - 92866..93057 (+) 192 WP_012897234.1 hypothetical protein -
  QYH60_RS00515 (QYH60_00515) rsmI 93134..94009 (-) 876 WP_301401202.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  QYH60_RS00520 (QYH60_00520) yabA 94009..94335 (-) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  QYH60_RS00525 (QYH60_00525) yaaT 94328..95110 (-) 783 WP_301401203.1 stage 0 sporulation family protein Regulator
  QYH60_RS00530 (QYH60_00530) - 95162..96022 (-) 861 WP_012897231.1 DNA polymerase III subunit delta' -
  QYH60_RS00535 (QYH60_00535) tmk 96155..96790 (-) 636 WP_012897230.1 dTMP kinase -
  QYH60_RS00540 (QYH60_00540) yycF 96968..97669 (+) 702 WP_003131580.1 response regulator YycF -
  QYH60_RS00545 (QYH60_00545) vicK 97662..99104 (+) 1443 WP_301401204.1 cell wall metabolism sensor histidine kinase WalK Regulator
  QYH60_RS00550 (QYH60_00550) vicX 99273..100085 (+) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29816.31 Da        Isoelectric Point: 6.3520

>NTDB_id=778134 QYH60_RS00525 WP_301401203.1 94328..95110(-) (yaaT) [Lactococcus lactis subsp. lactis strain KMGR2-43]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLQERSKQAK
DKVRQLIIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=778134 QYH60_RS00525 WP_301401203.1 94328..95110(-) (yaaT) [Lactococcus lactis subsp. lactis strain KMGR2-43]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCTAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTCAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTATCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385