Detailed information NTG0776508

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PJW05_RS11540
• Genome accession: NZ_CP116304
• Coordinates: 2510165..2512390 (+)
• Length: 741 a.a.
• NCBI ID: WP_271411833.1
• Uniprot ID: -
• Organism: Pseudomonas sp. Q1-7
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2505165..2517390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PJW05_RS11510	-	2505190..2505480 (-)	291	WP_271411827.1	phosphodiesterase	-
PJW05_RS11515	-	2505490..2506074 (-)	585	WP_271411828.1	PilZ domain-containing protein	-
PJW05_RS11520	-	2506242..2507492 (+)	1251	WP_271411829.1	lipoprotein-releasing ABC transporter permease subunit	-
PJW05_RS11525	lolD	2507485..2508168 (+)	684	WP_271411830.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PJW05_RS11530	-	2508170..2509414 (+)	1245	WP_271411831.1	lipoprotein-releasing ABC transporter permease subunit	-
PJW05_RS11535	-	2509464..2509991 (-)	528	WP_271411832.1	DUF2062 domain-containing protein	-
PJW05_RS11540	comA	2510165..2512390 (+)	2226	WP_271411833.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PJW05_RS11545	exbB	2512462..2513097 (+)	636	WP_271411834.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
PJW05_RS11550	-	2513094..2513540 (+)	447	WP_271411835.1	biopolymer transporter ExbD	-
PJW05_RS11555	lpxK	2513540..2514544 (+)	1005	WP_271411836.1	tetraacyldisaccharide 4'-kinase	-
PJW05_RS11560	-	2514584..2514769 (+)	186	WP_077525327.1	Trm112 family protein	-
PJW05_RS11565	kdsB	2514766..2515530 (+)	765	WP_271411837.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PJW05_RS11570	-	2515530..2515994 (+)	465	WP_271411838.1	low molecular weight protein-tyrosine-phosphatase	-
PJW05_RS11575	murB	2515991..2517010 (+)	1020	WP_271411839.1	UDP-N-acetylmuramate dehydrogenase	-
PJW05_RS11580	-	2517066..2517347 (-)	282	WP_271411840.1	pyrimidine/purine nucleoside phosphorylase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80335.58 Da
• Isoelectric Point: 10.8225

>NTDB_id=776508 PJW05_RS11540 WP_271411833.1 2510165..2512390(+) (comA) [Pseudomonas sp. Q1-7]
MVSGLATLAVGLLLLRWMPSLPPVWWLYLQLLLGFALLGSRAWRPGLLLLGLGWACLSAQWALDDRLDPRLDGQVRWLEG
RVVGLPESADGMVRFELEDLHSTRARLPRRLRLSWLDGPRVLAGERWRLAVRLKRPRGLVNPATFDYEAWLLARRIGATG
SVKVGERLQPASGPVAWRDALRQRVLQVDAWGRAGGLAALVLGDSSGLQARDWRLLQDTGTTHLMVISGQHITLFAGVLY
GLVASLARFGLWPRRLPWLPWACAMAFAGGLGYGVLAGFDVPVQRACMMLAVVLIWRLRFRHVGLLTPLLVALCTVLLAD
PLVVLLPGFWLSFGAVVLLVLAFAGRLGAWSWWRTWWRAQWVMGIGLVPLLLALALPISLSGPLANLLAVPWVSLVVLPL
ALSGTLLLGVGPLGEALLWLAGGALELLLQILAWAAAQLPAWIPSRVPLWAWLLGAIGVLLLIAPAGLPLRAFGFALSLP
MWFPPQALPAAGQAEVWVLDVGQGLSVLVRTRAHALLYDAGPRQGEFDLGERVVIPVLRGLGVRELDLMLISHAHSDHAG
GAVAVSRGLTVAKVLGGEAGQLPGELGALPCQAGDAWTWDGVKFLVWHRPVPGDSNESSCVLAVEANGERILLSGDIGAR
GEAAWIASGQPLAARWLVAGHHGSRTSSTRFFLRAVAPEKVLISRGHQNAFGHPHPLVVSRVRALPAEIHDTAEQGALRL
HLGAWGEAEGWREKSVFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=776508 PJW05_RS11540 WP_271411833.1 2510165..2512390(+) (comA) [Pseudomonas sp. Q1-7]
ATGGTTTCGGGCCTGGCCACGCTTGCCGTCGGCCTTCTTCTGTTGCGCTGGATGCCCAGCCTGCCGCCGGTCTGGTGGCT
CTATCTGCAACTGCTGCTCGGCTTCGCGCTGCTGGGCTCGCGTGCCTGGCGGCCAGGGCTCTTGCTGCTCGGCCTCGGTT
GGGCCTGCCTGAGCGCTCAATGGGCACTGGATGACCGCCTGGACCCCCGGCTTGACGGTCAGGTGCGCTGGCTGGAAGGG
CGGGTGGTCGGCTTGCCGGAGTCGGCCGACGGCATGGTGCGTTTCGAGCTGGAGGACCTGCATTCGACGCGGGCGCGGCT
ACCCCGGCGCCTGCGGTTGTCCTGGCTAGACGGTCCGCGTGTGCTGGCGGGGGAGCGCTGGCGCCTGGCTGTCCGACTCA
AGCGGCCCCGCGGCTTGGTGAATCCGGCGACTTTCGATTACGAGGCCTGGCTGCTGGCGCGGCGCATCGGGGCGACCGGC
TCGGTCAAGGTCGGCGAGCGACTGCAGCCAGCCAGCGGGCCTGTTGCCTGGCGCGATGCGCTGCGCCAGCGCGTCTTGCA
GGTGGACGCCTGGGGGCGAGCCGGCGGCCTCGCCGCGTTGGTGCTGGGCGACAGTTCCGGCCTGCAGGCGCGGGACTGGC
GCCTGCTGCAGGACACCGGAACCACTCATCTAATGGTGATATCGGGCCAGCACATCACCCTGTTCGCCGGCGTGCTCTAT
GGTCTGGTGGCGTCGCTCGCGCGCTTCGGACTCTGGCCGCGACGCCTGCCCTGGTTGCCCTGGGCTTGCGCCATGGCCTT
CGCGGGCGGGCTCGGTTACGGCGTCCTGGCGGGCTTCGATGTGCCGGTGCAGCGGGCCTGCATGATGCTGGCCGTAGTGC
TGATCTGGCGCCTGCGCTTTCGCCACGTTGGCCTGCTCACCCCTTTGCTGGTCGCGCTTTGCACGGTGTTGCTGGCCGAT
CCGCTGGTGGTCCTGCTGCCTGGTTTCTGGCTCTCGTTCGGCGCCGTGGTCCTGCTGGTCCTGGCCTTTGCCGGGCGACT
CGGCGCCTGGTCCTGGTGGCGGACCTGGTGGCGCGCCCAGTGGGTCATGGGGATCGGCCTGGTGCCGCTGCTACTCGCGC
TGGCCTTGCCCATCAGTCTCAGCGGTCCGCTGGCCAACCTGCTGGCAGTGCCCTGGGTCAGTCTGGTGGTACTGCCGCTG
GCGCTGTCGGGGACCCTGTTGCTCGGCGTTGGCCCGCTGGGGGAAGCGTTGCTCTGGCTGGCCGGAGGGGCCCTGGAACT
CCTGCTCCAGATCCTCGCCTGGGCCGCTGCGCAGCTACCCGCCTGGATTCCGTCGCGGGTTCCGCTTTGGGCCTGGCTGC
TGGGTGCGATCGGTGTTCTGTTGTTGATCGCTCCGGCCGGCCTGCCGTTGCGCGCCTTTGGCTTCGCCCTGTCGTTGCCG
ATGTGGTTTCCGCCGCAGGCGCTTCCGGCAGCCGGTCAGGCCGAGGTATGGGTGCTCGATGTGGGGCAGGGACTTTCGGT
GCTGGTTCGGACTCGCGCGCATGCGTTGCTCTACGATGCTGGTCCACGCCAGGGCGAGTTCGATCTCGGCGAGCGGGTGG
TAATTCCGGTCCTTCGAGGTCTTGGAGTACGGGAGCTGGACTTGATGCTGATCAGCCACGCTCACTCCGATCACGCCGGC
GGCGCTGTGGCCGTAAGCCGGGGGCTGACGGTCGCCAAGGTGCTCGGTGGAGAGGCCGGGCAGTTGCCCGGCGAGCTCGG
CGCGCTGCCGTGCCAGGCCGGGGATGCCTGGACCTGGGATGGGGTGAAGTTCCTCGTCTGGCACAGGCCCGTGCCCGGCG
ACAGCAATGAAAGCTCGTGTGTACTGGCCGTCGAGGCCAATGGCGAGCGCATCCTGCTCAGTGGCGATATCGGCGCCCGC
GGCGAGGCGGCCTGGATCGCCAGTGGCCAGCCGCTCGCGGCGCGCTGGCTGGTGGCCGGCCACCATGGCAGCCGCACATC
CTCCACCCGCTTTTTCCTGCGCGCGGTGGCGCCTGAGAAGGTGCTGATCTCGCGAGGCCACCAGAACGCCTTCGGGCATC
CGCACCCGCTTGTCGTTTCGCGGGTCCGGGCTCTCCCGGCCGAGATCCATGACACGGCGGAGCAGGGCGCATTGCGGCTG
CACCTGGGGGCCTGGGGCGAGGCCGAGGGCTGGCGGGAAAAGTCCGTTTTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-687)

• Competence protein (Competence) (200-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.165	97.301	0.595
comA	Ralstonia pseudosolanacearum GMI1000	36.884	100	0.374