Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | MWM06_RS08015 | Genome accession | NZ_AP025596 |
| Coordinates | 1440370..1440720 (+) | Length | 116 a.a. |
| NCBI ID | WP_244360320.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain SNM1-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1435370..1445720
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MWM06_RS07990 (TthSNM11_16050) | - | 1436125..1437627 (+) | 1503 | WP_244360312.1 | hypothetical protein | - |
| MWM06_RS07995 (TthSNM11_16060) | - | 1437624..1438061 (+) | 438 | WP_244360314.1 | GspH/FimT family pseudopilin | - |
| MWM06_RS08000 (TthSNM11_16070) | - | 1438058..1438495 (+) | 438 | WP_244360316.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| MWM06_RS08005 (TthSNM11_16080) | - | 1438492..1439112 (+) | 621 | WP_244360318.1 | type II secretion system protein | - |
| MWM06_RS08010 | - | 1439182..1439868 (-) | 687 | Protein_1560 | IS5-like element ISTth7 family transposase | - |
| MWM06_RS08015 (TthSNM11_16110) | pilV | 1440370..1440720 (+) | 351 | WP_244360320.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| MWM06_RS08020 (TthSNM11_16120) | - | 1440969..1441448 (+) | 480 | WP_244340535.1 | DUF1640 domain-containing protein | - |
| MWM06_RS08025 | - | 1441524..1442062 (+) | 539 | Protein_1563 | Uma2 family endonuclease | - |
| MWM06_RS08030 (TthSNM11_16140) | - | 1442085..1442384 (+) | 300 | WP_008631315.1 | nucleotidyltransferase | - |
| MWM06_RS08035 (TthSNM11_16150) | - | 1442371..1442733 (+) | 363 | WP_060384345.1 | HepT-like ribonuclease domain-containing protein | - |
| MWM06_RS08040 (TthSNM11_16160) | - | 1442767..1443324 (-) | 558 | WP_244360323.1 | Uma2 family endonuclease | - |
| MWM06_RS08045 (TthSNM11_16170) | - | 1443343..1443999 (-) | 657 | WP_143591267.1 | chromosome segregation protein ScpA | - |
| MWM06_RS08050 (TthSNM11_16180) | trpS | 1443996..1445009 (-) | 1014 | WP_244340541.1 | tryptophan--tRNA ligase | - |
Sequence
Protein
Download Length: 116 a.a. Molecular weight: 12043.78 Da Isoelectric Point: 4.3821
>NTDB_id=77593 MWM06_RS08015 WP_244360320.1 1440370..1440720(+) (pilV) [Thermus thermophilus strain SNM1-1]
MRNAKGFTLIELLIVIAIIAILAAVLIPNVLNARKRATDSAAQAFGRQVITWLAAADTAGVDVTKVTSCTDALLQAEGAP
AELPNGVAGCSIEYDGAGQWTVTVTSDAGNTFTFTY
MRNAKGFTLIELLIVIAIIAILAAVLIPNVLNARKRATDSAAQAFGRQVITWLAAADTAGVDVTKVTSCTDALLQAEGAP
AELPNGVAGCSIEYDGAGQWTVTVTSDAGNTFTFTY
Nucleotide
Download Length: 351 bp
>NTDB_id=77593 MWM06_RS08015 WP_244360320.1 1440370..1440720(+) (pilV) [Thermus thermophilus strain SNM1-1]
ATGCGGAACGCGAAAGGCTTTACCCTGATTGAGCTCCTGATCGTCATCGCCATCATCGCCATCCTGGCGGCGGTGCTGAT
CCCGAACGTGCTGAACGCCCGTAAGCGGGCCACCGATAGCGCCGCTCAGGCCTTTGGCCGCCAAGTCATCACCTGGCTCG
CCGCCGCTGACACGGCCGGTGTGGACGTCACTAAGGTCACGAGCTGTACCGACGCGCTCCTTCAAGCGGAAGGGGCTCCC
GCTGAACTCCCCAATGGGGTAGCTGGGTGCTCCATCGAGTACGATGGCGCCGGTCAGTGGACGGTGACGGTCACGTCTGA
TGCCGGTAACACGTTCACCTTCACTTACTGA
ATGCGGAACGCGAAAGGCTTTACCCTGATTGAGCTCCTGATCGTCATCGCCATCATCGCCATCCTGGCGGCGGTGCTGAT
CCCGAACGTGCTGAACGCCCGTAAGCGGGCCACCGATAGCGCCGCTCAGGCCTTTGGCCGCCAAGTCATCACCTGGCTCG
CCGCCGCTGACACGGCCGGTGTGGACGTCACTAAGGTCACGAGCTGTACCGACGCGCTCCTTCAAGCGGAAGGGGCTCCC
GCTGAACTCCCCAATGGGGTAGCTGGGTGCTCCATCGAGTACGATGGCGCCGGTCAGTGGACGGTGACGGTCACGTCTGA
TGCCGGTAACACGTTCACCTTCACTTACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.966 |
100 |
0.44 |
| pilA2 | Legionella pneumophila str. Paris |
39.474 |
98.276 |
0.388 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
38.596 |
98.276 |
0.379 |