Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   PF996_RS16675 Genome accession   NZ_CP116014
Coordinates   3231674..3233977 (-) Length   767 a.a.
NCBI ID   WP_070082286.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM124633     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3226674..3238977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF996_RS16635 (PF996_16635) - 3227134..3227565 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  PF996_RS16640 (PF996_16640) - 3227565..3227906 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  PF996_RS16645 (PF996_16645) - 3227899..3229380 (+) 1482 WP_070082284.1 Na+/H+ antiporter subunit D -
  PF996_RS16650 (PF996_16650) - 3229386..3229862 (+) 477 WP_070082285.1 Na+/H+ antiporter subunit E -
  PF996_RS16655 (PF996_16655) - 3229862..3230146 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  PF996_RS16660 (PF996_16660) mnhG 3230130..3230504 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  PF996_RS16665 (PF996_16665) - 3230544..3230927 (-) 384 WP_017419422.1 hotdog fold thioesterase -
  PF996_RS16670 (PF996_16670) comA 3230949..3231593 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  PF996_RS16675 (PF996_16675) comP 3231674..3233977 (-) 2304 WP_070082286.1 histidine kinase Regulator
  PF996_RS16685 (PF996_16685) comQ 3234130..3235062 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  PF996_RS16690 (PF996_16690) degQ 3235247..3235387 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  PF996_RS16695 (PF996_16695) - 3235852..3236193 (+) 342 WP_257989027.1 hypothetical protein -
  PF996_RS16700 (PF996_16700) - 3236200..3237423 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 767 a.a.        Molecular weight: 89000.47 Da        Isoelectric Point: 8.5629

>NTDB_id=775287 PF996_RS16675 WP_070082286.1 3231674..3233977(-) (comP) [Bacillus velezensis strain SRCM124633]
MKKLIKPFTISIIILSVIYVCYVAFINMNGLIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTLYAFISVFYHLYKFKYSEHAYILKILILTNTLSFLPFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQF
VANKIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIVIFVIFYFKEVMDYKFRLKRFSEKFN
YQDSIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKKDNEPDWEMYSKEFKKVTSEIGKIIE
LNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMF
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLG
LVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVG
CNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2304 bp        

>NTDB_id=775287 PF996_RS16675 WP_070082286.1 3231674..3233977(-) (comP) [Bacillus velezensis strain SRCM124633]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATGAATGGACTTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTACCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGTTTAATATGTATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGCTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTCTCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGATTTTAATTTTAACAAACACGCTCTCTTTTTTACCTTTTTTGCTTTTTTATGTAATCCCAATTATTT
TGACAGGAAGTTATATATTAGATGCGTTGGCAGCGGCATCCCTGCTCGTACTTATCCCATTGGGATTGGTATACCAGTTC
GTAGCTAACAAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCT
TTTTATTGTTGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTA
TTGTGATATTTGTCATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAAT
TATCAAGATAGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAA
GACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATA
AAAAGGATAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATCATTGAG
CTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGAGGAAGTTCTTATGTTTTGCTTTGTTTGTCTACTATTAATAC
ACCGAGACTGACACGAGATGAGATTTCATGGCTGAAGACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATGTGATAC
AGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTT
ACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCG
CCAGTGTGAACTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGA
ATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGT
CTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTT
TACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATT
CACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGA
TGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCTTGACGG
ACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(567-636)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

73.247

100

0.735