Detailed information NTG0775206

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PF986_RS12635
• Genome accession: NZ_CP116013
• Coordinates: 2577632..2578795 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM124349
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2572632..2583795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PF986_RS12605 (PF986_12605)	-	2572897..2573316 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
PF986_RS12610 (PF986_12610)	comFC	2573390..2574079 (-)	690	WP_201741798.1	phosphoribosyltransferase family protein	Machinery gene
PF986_RS12615 (PF986_12615)	-	2574085..2574369 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
PF986_RS12620 (PF986_12620)	comFA	2574427..2575812 (-)	1386	WP_104842867.1	DEAD/DEAH box helicase	Machinery gene
PF986_RS12625 (PF986_12625)	-	2575920..2576768 (-)	849	WP_003151387.1	DegV family protein	-
PF986_RS12630 (PF986_12630)	degU	2576866..2577555 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
PF986_RS12635 (PF986_12635)	degS	2577632..2578795 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
PF986_RS12640 (PF986_12640)	-	2579018..2579665 (+)	648	WP_060657503.1	YigZ family protein	-
PF986_RS12645 (PF986_12645)	-	2579670..2580863 (+)	1194	WP_128974134.1	LCP family protein	-
PF986_RS12650 (PF986_12650)	-	2580963..2582039 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
PF986_RS12655 (PF986_12655)	tuaH	2582171..2583367 (-)	1197	WP_071182023.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=775206 PF986_RS12635 WP_003151385.1 2577632..2578795(-) (degS) [Bacillus velezensis strain SRCM124349]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=775206 PF986_RS12635 WP_003151385.1 2577632..2578795(-) (degS) [Bacillus velezensis strain SRCM124349]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTCCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948